Gene Dfer_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5403 
Symbol 
ID8229014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6523696 
End bp6524418 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID644933248 
Productprotein of unknown function DUF1080 
Protein accessionYP_003089761 
Protein GI255039140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.784732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TTTTCGTTAC CGCACTCGCT GCATTGCTAT CCGCGAACGC CTACGCCCAG 
ACGCTCAACA GCCTCTCCGC CACCGAGAAA AAAGAAGGCT GGAAACTGCT GTTCGACGGC
AAGGACCTCA AAGGATGGCA CGCCTACAAC GGCAAGGCGC CCGGCTCGGC CTGGCTGATC
GAGGATGGGG CCATTAAGCT CAATGTGCCC GAGCGGGCCG GCAACAAAGC CAAAAACGGC
GGTGATATCG TGACCGACGA GCTCGTGAAC GGCGATTTCG AATTCAAGGC CGAATGGAAG
GTGAGCAAAT ACGCGAACAG CGGCATTTTC TTTTTCGTGC AGGAATCTCC CAAATATCAA
AACATGCACA ACACCGGCCT TGAATTGCAG GTGATCGACG ATAAAATATA TGAAGGCGCC
AAAGAAAACA CCCACCGCGC GAGCGATTTC TTCGGTATTG CCAATGCCCG ACTGCGCGAA
GGTAACCCGC AGGGAGAATG GAACAAGATC CATTTTATCG TCAAAAAGGG CAAGCTGACC
GTTTATCAGA ACGAGTTTAT GGTGCAGGAG CACGACCTTA ACGGCGCCGA CTGGAAACAG
CGCATTGCCA ACAGCGGGCT CAAAGCCGCT CCCATCGCCA AAGGCACTTA CAACGGACGC
ATTGGTTTGC AGGATTGGGG CAGCACGGTT TGGTACAGGA ATATCAATTT GAGGAAACTG
TGA
 
Protein sequence
MTRFFVTALA ALLSANAYAQ TLNSLSATEK KEGWKLLFDG KDLKGWHAYN GKAPGSAWLI 
EDGAIKLNVP ERAGNKAKNG GDIVTDELVN GDFEFKAEWK VSKYANSGIF FFVQESPKYQ
NMHNTGLELQ VIDDKIYEGA KENTHRASDF FGIANARLRE GNPQGEWNKI HFIVKKGKLT
VYQNEFMVQE HDLNGADWKQ RIANSGLKAA PIAKGTYNGR IGLQDWGSTV WYRNINLRKL