| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5394 |
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| Symbol | |
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| ID | 8229005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6516165 |
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| End bp | 6517676 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644933239 |
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| Product | DNA repair nucleotidyltransferase/DNA polymerase |
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| Protein accession | YP_003089752 |
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| Protein GI | 255039131 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.280036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATC GTTTTGCATC CATATGGTTC CCAAATCTGG CGACGGACCA TCAGATTCGC
GTCCGGCCGG AGCTTTACGG GCTTGAATTT GCACTCGCGG TGCCGGAGCG CGGGCGCATG
GTAGTCACCG CATCGAGCGC CGAAGCAAAA GCGCTGGGCA TTGAAGCGGG TATGGTGGTG
GCTGATGCCC GGGCCATTCT GCCGTCGCTC ATCGTGCTCG ACGACGAGGC GGAAGTGGCA
CGGCAGGCAT TGCGGTCGCT GGCCGAGTGG TGCCTCCGCT ACACGCCCAC CGTTGCCCTG
GATACGCCCG ACGGACTGAT ACTGGATATA ACGGGATGTG CCCATTTGTG GGGCGGCGAA
AAAGCCTATG TGCATGACCT CATCGCCAAA CTGCATCAGG CCGGCTATAC CGCCCGTGCA
GCCTTGGCGG GCACCGTTGG CGCGGCGTGG GCGCATGCAC ATTTCGGGGT TTCGGGAACG
ATCGTTGCGC CGGGCGAGCC GCATAACGGG CTGCTAAAAC TGCCGCCGGC CGCCCTCCGC
CTCCCGCCCG AAACGGTAGA GAAAATGCAG AAGCTGGGCT TTTATTACAT CGGCGGGTTC
GTCCGCATTC CCGCCAGAAT GCTGCGCCGG CGTTTCGGAG AGGATTTGAT GGAAAAGCTG
AACAAGGCGC TGGGCTATGC GCATGAATTC ATCGAACCGA TCCGGCAAAC TACCCCTTAC
CAGGAAAGGC TCCCCTGCCT GGAACCCATC GTAACCGCCA CGGGCATTGA AATAGCCTTG
CAAAAACTCC TCGAAACGCT TTGCGGCCGC CTGGCGAAAG AGGGTAAAGG GCTGCGCAAA
AGCGTTTTGC GCTGCTATCG CGTGGATGGC CAGGTGCAGC GGATCGATAT TGTAACCAAT
CGGGCGTCGC ATCATGTCAA GCACCTTTTC CGGCTGTTTG AGCTGAAAAT CAAGACCATC
GCCCCCGGTT TCGGGATCGA ACTGTTTCTG CTGGAAGCGC CCGAAGTGGA AGACATGAGC
GTTACGCAGG AAACCATGTG GGACACAACG GGCGGTTTCG AAAGCGCTGC CATTACCGAG
CTGCTCGATG CCGTAACCGG CCGGACCGGC ACCGACGCCG TGCATCGTTA CCTGCCCGAC
GAACACCATT GGCCGGAAAG GTCTGTCAAA CTGGTTACCT CACTCCGCGA GCAACCGAAA
ACCACTTGGC GAACCGATCG CCAAAGACCG GTTTTCCTGC TCCCGAAACC GGAGATCATT
GAGGTAACCG CGCCCGTGCC CGACTACCCT CCCACCGTTT TCAGGCACAA GGGTAAAGTA
CATTATATAG ATAAATCCGA GGGGCCCGAG CGCATCGAGC AGGAATGGTG GCTGCAACAG
GGCCTCCACC GCGATTATTA CACACTGGAA GACCAGGACG GGCGGCGTTA CTGGGTTTTC
AGGCTCGGGC CGTACTCCGA AGAAGAGGAA GCAGAGCGCC CTGAATGGTT TTTACACGGT
TTTTTTGCCT GA
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| Protein sequence | MPDRFASIWF PNLATDHQIR VRPELYGLEF ALAVPERGRM VVTASSAEAK ALGIEAGMVV
ADARAILPSL IVLDDEAEVA RQALRSLAEW CLRYTPTVAL DTPDGLILDI TGCAHLWGGE
KAYVHDLIAK LHQAGYTARA ALAGTVGAAW AHAHFGVSGT IVAPGEPHNG LLKLPPAALR
LPPETVEKMQ KLGFYYIGGF VRIPARMLRR RFGEDLMEKL NKALGYAHEF IEPIRQTTPY
QERLPCLEPI VTATGIEIAL QKLLETLCGR LAKEGKGLRK SVLRCYRVDG QVQRIDIVTN
RASHHVKHLF RLFELKIKTI APGFGIELFL LEAPEVEDMS VTQETMWDTT GGFESAAITE
LLDAVTGRTG TDAVHRYLPD EHHWPERSVK LVTSLREQPK TTWRTDRQRP VFLLPKPEII
EVTAPVPDYP PTVFRHKGKV HYIDKSEGPE RIEQEWWLQQ GLHRDYYTLE DQDGRRYWVF
RLGPYSEEEE AERPEWFLHG FFA
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