| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5367 |
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| Symbol | |
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| ID | 8228978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6485759 |
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| End bp | 6490039 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644933212 |
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| Product | cobaltochelatase, CobN subunit |
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| Protein accession | YP_003089725 |
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| Protein GI | 255039104 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC AGCGTGTTAC CCGTTCCGAT GGAAAATCGA TCAACCTCGT GCAGCGGCGC
GGGCATCTTT CATATTGCTA CAATGCCTGC TGCTGCGGAC GGGTCGACCG CGGCTATGCG
CCCATTCCGG TGGAGTTGTA TAAAAACGAA TGGCTCCGGC GCAAGCTGCG CAACGTGGTG
CACATGACTA AGGGCGGCTG CCTGGGACCA TGCACGCTGG CAAACGTGGT AACGCTTCTG
TTCGACGGGC ATTCGGTGTG GTTCCATTCC ATCAATTATG AATGGCAGAT CATCGCGATT
TTTGATTATA TCGAAAGCAT GGTGAAGGCC GACAGGTACC TCGTGCCGCC GTCGGACCTG
GCCGAATATG TATTTCAATT TTATACGTGG AAAGGTTCCG AAGCCTCTAC GGCACTCGGA
CAGACCGCCG TACCCACAGA CGGTATCGTT TTTCTCACCC ACGCCGACAC CGACCTGCTT
ACGCTCGACC GCGCCATGCA GCTGCTGCCC GACGACTTTC CCAAAACGAC CGGCATTGGC
CTGATGGCGA TCAAAAGCGA GGAGCAAATG CAGCAGCTAT TACAGCGCGA AATCGCCGGG
GCGAAAATCA TCATCGTCCG CATTCACGGC AGGCTGAGCA GCATTCCCGG GTTTAATGAA
CTCGTGAAAC TGGCCGGCCA GCGCGGGCAG CACCTGATCG TCGTGAGCGG AACGGGCGAG
CTGAACCCCG AGTTTGCGGC CGTTTCCACC GTGTCGCCCG CCATTTTGCA CGAAACGTTG
GCCTATTTGC AGGCAGGCGG ATACAATAAC CTGATTTCGC TGCTCAGCTA CCTTTCCGAC
CATTTGCTGA TGACCGGCTT CGGGGCCGAT GCACCGGTAC ATTTGCCCGA GCACGGCATT
TACCACCCCG ATCTGCCCGA GTTTGCAGAC CTGGCCGACT GGCTGAAACA CCGCGATCCC
GCTCTGGCGA CCATTGGCAT TACCTTCTAC CGCGCGCACT GGCTCAGCGG CAATACTGCT
TTCGTGGATG CGATGATCCG TTCGCTCGAA GACCGTGGCG TGAATGTGCT GCCGGTATTT
ACGTCCTCGC TCAAATCCGT GGACAATGCC ACCGGTAAGC CGCTTGCATT CAAGTACTTC
GATACTGCGG CGGGGACGGG TATTGATGTG CTGGTGAACA CGATTTCCTT TGCCATGACG
GACATCCGTC CGGCGGGGCA GACGAGTAAT GCACCGGAGG CACTACTTGA CATGAATGTG
CCTGTTTTGC AGGCTATTAC GAGCGGTATG GGCGCTGGGC CGTGGGAATC ATCGTCGCGC
GGACTCAATC CGCTGGATAC GGCCATGAAT GTGGCTATCC CGGAGTTCGA CGGACGCATT
ATCACCGTCC CGGTTTCATT CAAGGAGAAA GGAAAGGAAG CGCGCGGCTA TGTGCCGTTG
GATAACCGCG TTGAGCGTGT TGCTGGTATA GCTGTTCGTT TTGCAAGACT AAAACATTTG
AGGAATGCGG ATAAGAAAGT CGCATTCATT TTAACCAATT CCAATACAAA GGCCTCGCAG
ATCGGTAATG CCGTGGGACT CGACGCGCCG GCTTCGCTGC TGCAAATCCT CCGGGCGATG
CGCGACGAGG GCTACCGCAT TGGCGACTTG CCGGCGAGCG GAACGGATCT GATCCATTCG
CTGATCGACC GTTGCGCTTA TGACGCGGAC TTTCTCACGC CCGGGCAGCT GGCGCAGGCG
GCCGCGCACG TGTCGGCAGC ACGATATGCC GGTTGGTTTG AAGAACTGCC CGACACGGCA
CGCGGGAAAA TGCTGAAACA ATGGGACCCG CCTCCCGGCG AAACTTACGT GCACGACGGG
CACATTGCCC TGGCCGGGCT CGACCTGGGG AATGCATTTG TGGCATTGCA GCCGCCGAGG
GGATACGGAA TGGATCCCGA TGCGATTTAC CACAAGCCCG ATCTGCCTCC CACGCACCAT
TATTACGCAT TGTACCGCTG GCTCCGCGAC GATTGGGGCG CCGACGCCAT CGTGCATGTA
GGCAAGCACG GCACGTTGGA ATGGCTGCCG GGAAAAGGGA TCGGATTGTC GGAAAACTGC
TTTCCCGATG CATTTCTGGC CGATTTACCA TTGTTTTACC CCTTTATCAT CAACGACCCC
GGCGAAGGTT CGCAGGCCAA ACGGCGCGCG CACGCGGTGA TCGTCGACCA TCTCACGCCG
CCTATGACTT CGGCGGATAC TTATGGCGAA CTCGCGCAGC TTACGCAGCT GGTGGACGAG
TATTACCAGG TCGAAAGCCT CGATCCCTCG AAACTGCCGC TGCTGCAAAG GCAGATCTGG
GACCTGATTC AACAGACTAA CCTCGACGCC GACCTTTCGG CTATGCTCAG CCGCGACCAC
GGCGACCATA AACATGACTG GGACGATGAA ATGACGCCCG AAGGCGTGCC GGTGAGCCTC
ACCGAAATGG ATGGCAAGGA CATTGCCCAC CTGATCGAGG ACATCGACGG ATACCTGTGC
GAGCTGGGCG CGGCGCAGAT CCGCAACGGG CTGCACACTT TGGGTGAAAT GCCCGAAGGC
GAGGCGCTCA TTGATATGCT GCAATCGCTT ACAAGGCTCC CAAACGGCCC CATTCCGGGC
ATGCAGGCGA CATTGGCACA TTTATATGGT TTAGAAATCA ATACACTTCA TCAACAAAAA
GGACATAAAC TACCCGAACC GGCCGAAAAT CTGGCTGACT GGGCGGGAAG GCCGATCGTG
ACTGCCGCCG ACGCGCTGGA AGTGCTCGAT GAAATGGCCT CCCACATGAT GCGCCTCTTC
GAACATTACC GATTTGACGT ACAGGCTGCC GACCGAATAA TATTCGAATC CATTCACCGC
GATCCGACGC TGCCCGAAAT GGCCGCCCTG CGTGCGATAC TCGCATTTGT ATCGCAGGAA
CTCGTTCCCA ATCTGGCCCG CACCGACGAG GAGATCAGCA ACCTGCTGCA TGGCCTCTCG
GGTGGATACG TTCCCGCGGG CCCGAGCGGC GCGCCTACCC GCGGGATGGC GCATGTGCTG
CCTACGGGCA GGAATTTTTA CGCCGTCGAC CCGCGGGTGT TGCCTTCCAA AGCCGCCTGG
GAAGTGGGGC AGCAGCTCGC GAAGGAAGTC CTGGACCGCC ATTGGAAAGA AACCGGCCGC
TATCCCGAGA GCGTGGGGAT CAGTATCTGG GGCACAAGCG CGATGCGCAC GCACGGCGAC
GATGTGGCCG AAGTGCTCGC ATTGCTTGGT GTGAGGCCGG TATGGCAAGC TGAGAGCCGG
CGGGTCAATG GGTTGAAAAT CATGTCATTG GAAGAGCTGG GCAGGCCGCG CGTTGATGTG
ACCACGCGCA TCAGCGGGTT TTTCAGGGAT GCATTCCCGC ACCTGATCGA GCTCATGGAC
GAGGCTGTGC AGCTGGTAAT TTCCGCGGAT GAGCAACCGG AGGATAATTT TATCCGAAAG
CACTATCTGA AAGAACTCGC CGAACTGCAA AAAGACGATG CATTGCCGAT CGAAGAAGCG
GAGGAGCGTG CCGCTTACCG CATTTTCGGA GCTGCGCCGG GGAGTTACGG CGCGGGTATT
TTGCCGCTCA TTAATGAAAA AAACTGGCAG AACGACGGAG ATTTTGCCAA AGCATATATC
AACTGGGGAG GCTATGCCTA CTCACGCAAT GCACAGGGCG TAGATGCACG GAAGGAGTTT
ACCGAGCGGC TGGCCAGCGT GGAAGTGGCA TTGCATAACC AGGACAACCG CGAGCACGAC
CTGTTCGATA GCGACGATTA CCTGCAATTT CACGGCGGTA TGATCGCCAC CATCCGCAAC
CTCACGGGAC AGCAGCCGCG GCATTATTTC GGGGATTCGC AGGACCCTGC CAAGCCGGTT
GTGCGGGATT TGAAGGAGGA AGCGCTGCGC GTTTTCCGAT CCCGGGTCGT GAATCCCAAA
TGGATCGAAA GCATTAAAAA ACACGGTTAT AAAGGTGGGC TTGAACTGAC GGCCACGGTG
GATTACCTGT TCGGCTACGA TGCCACGGCG CATGTGGTGG ACGACTGGAT GTATGAAAAG
GTAGCCGAAA CCTATGCGCT CGATGCGGAA ATGCAGCAGT TTTTTGAGCA AAATAATCCG
TGGGCGCTGA ATGCCATCGC GGAGCGGCTG CTCGAAGCGG AGCAGCGCGG GCTTTGGAAA
GCACCCTCCG AGGAAGCATT GGAGGGTTTA AGGAATTTGT ATCTCAAAAG TGAAGCCCTG
CTCGAATCGA GGACCGAGTA G
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| Protein sequence | MKRQRVTRSD GKSINLVQRR GHLSYCYNAC CCGRVDRGYA PIPVELYKNE WLRRKLRNVV
HMTKGGCLGP CTLANVVTLL FDGHSVWFHS INYEWQIIAI FDYIESMVKA DRYLVPPSDL
AEYVFQFYTW KGSEASTALG QTAVPTDGIV FLTHADTDLL TLDRAMQLLP DDFPKTTGIG
LMAIKSEEQM QQLLQREIAG AKIIIVRIHG RLSSIPGFNE LVKLAGQRGQ HLIVVSGTGE
LNPEFAAVST VSPAILHETL AYLQAGGYNN LISLLSYLSD HLLMTGFGAD APVHLPEHGI
YHPDLPEFAD LADWLKHRDP ALATIGITFY RAHWLSGNTA FVDAMIRSLE DRGVNVLPVF
TSSLKSVDNA TGKPLAFKYF DTAAGTGIDV LVNTISFAMT DIRPAGQTSN APEALLDMNV
PVLQAITSGM GAGPWESSSR GLNPLDTAMN VAIPEFDGRI ITVPVSFKEK GKEARGYVPL
DNRVERVAGI AVRFARLKHL RNADKKVAFI LTNSNTKASQ IGNAVGLDAP ASLLQILRAM
RDEGYRIGDL PASGTDLIHS LIDRCAYDAD FLTPGQLAQA AAHVSAARYA GWFEELPDTA
RGKMLKQWDP PPGETYVHDG HIALAGLDLG NAFVALQPPR GYGMDPDAIY HKPDLPPTHH
YYALYRWLRD DWGADAIVHV GKHGTLEWLP GKGIGLSENC FPDAFLADLP LFYPFIINDP
GEGSQAKRRA HAVIVDHLTP PMTSADTYGE LAQLTQLVDE YYQVESLDPS KLPLLQRQIW
DLIQQTNLDA DLSAMLSRDH GDHKHDWDDE MTPEGVPVSL TEMDGKDIAH LIEDIDGYLC
ELGAAQIRNG LHTLGEMPEG EALIDMLQSL TRLPNGPIPG MQATLAHLYG LEINTLHQQK
GHKLPEPAEN LADWAGRPIV TAADALEVLD EMASHMMRLF EHYRFDVQAA DRIIFESIHR
DPTLPEMAAL RAILAFVSQE LVPNLARTDE EISNLLHGLS GGYVPAGPSG APTRGMAHVL
PTGRNFYAVD PRVLPSKAAW EVGQQLAKEV LDRHWKETGR YPESVGISIW GTSAMRTHGD
DVAEVLALLG VRPVWQAESR RVNGLKIMSL EELGRPRVDV TTRISGFFRD AFPHLIELMD
EAVQLVISAD EQPEDNFIRK HYLKELAELQ KDDALPIEEA EERAAYRIFG AAPGSYGAGI
LPLINEKNWQ NDGDFAKAYI NWGGYAYSRN AQGVDARKEF TERLASVEVA LHNQDNREHD
LFDSDDYLQF HGGMIATIRN LTGQQPRHYF GDSQDPAKPV VRDLKEEALR VFRSRVVNPK
WIESIKKHGY KGGLELTATV DYLFGYDATA HVVDDWMYEK VAETYALDAE MQQFFEQNNP
WALNAIAERL LEAEQRGLWK APSEEALEGL RNLYLKSEAL LESRTE
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