| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5346 |
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| Symbol | |
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| ID | 8228957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6457895 |
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| End bp | 6460186 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933191 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089704 |
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| Protein GI | 255039083 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAAAAG ATCAGCGGGG CGAGCCGCTG GCAGGCGCCT CTGTCTCGAT CTCGAAACTG
GATCTTCATG AAATTACCAA CGAAAAAGGA GAATTCACAC TCAGTGTCCC GCGCCGCAGC
AGCTATGCGG TGAGTGCGCG GCACATTGGT TTTGTGGAGG TGAGCCGCAC GGTGGCGTTT
GGGGATTTGT CGCAACCATT GGTTTTAACA TTGAAAGACG ACCCCAAACA GCTCTCGGAA
GTGCAGGTTA CCGGCCGCAC CGAAACCCAG GAAGCGCGGT TGCAGCCCAT CAAAGCGGAG
GTGATCAACA CCCGGGCGGT GCAGGAGCAG CCCTCCACGC TCGTAGAACT GATGAACCGC
TCGGCGGGCA TCCGGATTCG CCAGACGGGC GGCCTCGGGT CCAATGCGGG CCTGATGATG
AATGGTTTCC AGGACCGCGC GATCAAGAAT TTCAAAGATG GTATTCCGAT GGATTACCTC
GGTGCAGGCT ACAACATCGG GCTCGTGCCT GTAAATATGC TCGAACGCGT AGAGGTGTAC
AAGGGCGTGC TGCCCACCAA CCTGGGCGCG GATGCGCTGG GCGGGGCGGT GAACCTGGTA
ACCAAGAAAT CGCTGTACCG CTATGCCGAG GCGTCGTACG AAATCGCTTC GTTCAACACC
CACCGTGCGT CGCTGAATGG GCTCTACACG GATACCACAC GCCATTTTTT CATCGGCGGC
GACGCATTCG TGAACCGTTC CGACAATAAT TACAAAGTGG ACGTAACCGT CACCGACCAC
GAAACCGCCG CCCGCCGCGA CGCCACCGTA CGGCTTTTCC ATAACCAATT CACCAATTAC
TATGCCGAAG CATACGGCGG GCTGACAGGC AAGCGCTGGG CCGATGAGCT GCGCGTGGGC
GTGACGTGGT TCCGCATTAA CCGGCAAAAC CAGTATGGCT CCTCGATGTC GCAGCCGTTC
GGGGCGGCGT TGAGCAGGCA ATACTCGGTG ATCCCTACCC TGCGCTACCG CAAGGCATTC
AACCGACTGA GCCTGGACCA GTTCCTCACC GTGAGTAATA TCCATACCCA GCAGGTGGAC
ACCGCTCGCG GAACCTACGA TTGGTTTGGC AAATTCATCC CGAGCCCGTC CCGCCAGGGC
GAGATTACAG CCACCGGCAG CCTCTCGGAC ATTACTTTTT TCTACTTCAC GAGCCGCACA
CACGTCGGAT ACCGGTTCAA TGACGTGCAC AAGGCGGAAA TCAACGTGGT ATCGACCAAC
ATTGGCCGCG ACGGGAACGA CCCGAGGGGC CTGAAACTTC CGCAGACGGG GCAGGATATT
CTTTCGCTTC CGGCAAAGTA TTACAAACTG GTAGGCGCTG CCGGCCTGCA ATCCGTATTT
TGGGATGAAA AACTGACCAA TCACCTGATT GCCAAATACT ATTATTACAA CACGTCTACC
ATTAATGTGG ACGTCTACGG CTCCGCATTG GGCGAGCACC GGTACACTTC CGACGGCAGT
TTCGGCATTG CGGAGGCTTT GAAACTGGCC GTTACGCCTT CTACGTTTTT CAGGGTTTCG
GCCGAGGTGG CCACGCGCCT GCCCGAGCAG GACGAAATGT TCGGCGACGG TAATTTCCAC
CGCTCCAACT TTTTACTCAA ACCGGAAAAG AGCGTGAATA TCAATGCCGG CTTCCGTACC
GAGAAACGCA ATGCTTACAA CCTGGAAATC AATGCATTTT ATCGCATTAC CCGCGACCTG
ATCCTCAAAA TGCCGATCGA TTTCCTGTTC ACCCAAAACC AGAACGTAAG CAATGTGAAA
GGCCTCGGGC TGGAAACCGA CCTGAACGTG AACCTTACCC GCTGGCTGCG CGCAAACGGC
AATTTCACCT ACCAGGATTT CCGCGTGTTC GACACCGGCA ACCGCCTGAC GGAGGATGCC
AGGCTACGCA ATACGCCCTA TTTCTTCGCC AACCTTGGCC TGAATGCCAA TATCACCCGC
ATGCCGGGAA AGGGACGTTT GCAGCTGTAT TACTATTTCA CGTTTGTCCG CGAATACTAC
CTCGACTACA TCCCGAAATC CCTCGAACCG GACGGTTTCC TCGGGCTTTG GGGAAAGGCC
AAATTCGAGG CGCCCAACAT TATCCCGAGC CAGGCATTGC ACTCTTTGGG CTTTACCTAC
CACCCGGTGA ACGATCGCTT TTCCGTTGGT TTTCAGGCTA AAAACATCTT CAATACCAAC
GTTTACGACA ATTTCCGGAT TCAGAATGCC GGCCGCAGTC TCCATTTGAA AGTCAACTAT
ACCCTCAAAT AA
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| Protein sequence | MVKDQRGEPL AGASVSISKL DLHEITNEKG EFTLSVPRRS SYAVSARHIG FVEVSRTVAF
GDLSQPLVLT LKDDPKQLSE VQVTGRTETQ EARLQPIKAE VINTRAVQEQ PSTLVELMNR
SAGIRIRQTG GLGSNAGLMM NGFQDRAIKN FKDGIPMDYL GAGYNIGLVP VNMLERVEVY
KGVLPTNLGA DALGGAVNLV TKKSLYRYAE ASYEIASFNT HRASLNGLYT DTTRHFFIGG
DAFVNRSDNN YKVDVTVTDH ETAARRDATV RLFHNQFTNY YAEAYGGLTG KRWADELRVG
VTWFRINRQN QYGSSMSQPF GAALSRQYSV IPTLRYRKAF NRLSLDQFLT VSNIHTQQVD
TARGTYDWFG KFIPSPSRQG EITATGSLSD ITFFYFTSRT HVGYRFNDVH KAEINVVSTN
IGRDGNDPRG LKLPQTGQDI LSLPAKYYKL VGAAGLQSVF WDEKLTNHLI AKYYYYNTST
INVDVYGSAL GEHRYTSDGS FGIAEALKLA VTPSTFFRVS AEVATRLPEQ DEMFGDGNFH
RSNFLLKPEK SVNINAGFRT EKRNAYNLEI NAFYRITRDL ILKMPIDFLF TQNQNVSNVK
GLGLETDLNV NLTRWLRANG NFTYQDFRVF DTGNRLTEDA RLRNTPYFFA NLGLNANITR
MPGKGRLQLY YYFTFVREYY LDYIPKSLEP DGFLGLWGKA KFEAPNIIPS QALHSLGFTY
HPVNDRFSVG FQAKNIFNTN VYDNFRIQNA GRSLHLKVNY TLK
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