Gene Dfer_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5333 
Symbol 
ID8228944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6442258 
End bp6443463 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content55% 
IMG OID644933178 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003089691 
Protein GI255039070 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0669473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.749841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG AAAAGTATAT TGAGCAGTAC CGCCGCGCAC TGTTGGATGA TGTGATCCCT 
TTCTGGATGA AAAACTCTCC CGACCGCGAA TCGGGCGGCT TTTTTACCTG CCTCGACCGG
GACGGCAATG TGTTCGATAC CGACAAATTT ATGTGGCTCC AATGCCGGCA GGTGTGGTGC
TTTGCCATGC TTTACAACCA GGTGGAAGCC CGGCAGGAAT GGCTGGATAT GGCGCTTTCG
GGTGCTGCAT TTTTGCAAAA ATTCGGGCGC GCGCAGCACA ACGGCCCGGA CGGCGGCGCT
AATAGCTGGT ATTTCTCGGT CGACCGCCAC GGAAACCCGC TCATGCAGCC GCACAGCATT
TTTTCCGATT GTTTCGCCAC CATGGCGTTC GGGCAACTTT ACAAGGCTAC CGGCCGGGAG
GAATTCAAAA CCATTGCCAC AGACACTTTT TACGATATTC TCAAACGGCA GGGCAATCCC
AAAGGTATTT ACAACAAGGG CGTGCCCGGT GCGCGGCCGT TGGAAAGCTT CGCGCTGCCG
ATGATCCTTT GTAACCTCGT CCTTGAAATC GAGCCGCTGC TGGAACCGGC GTTGGTGGAC
GAGGTGATCC AAAACGGCAT TGATACGGTG ATGAACAAGT TTTACCGGCC TGAGCTAGGC
GTAATCCTCG AAAATATAGC ACCGGACGGT TCCTTTTCGG ATTCATTCGA AGGCAGGCTG
GTGAACCCGG GCCACGGGCT GGAATCGATG TGGTTTATCA TGGATCTGGC CGAGCGCACT
AACGACAGCC AACTGGCGCA AAAGGCGGTG GACATCGCGA TCCAGCTCAT CGAATACGGC
TGGGATGATG AGCACGGCGG GATATTCTAT TTTATGGATA TAAAAGGCAA CCCGCCCCAG
CAGCTCGAAT GGGACCAGAA GCTCTGGTGG GTGCACATGG AAACGCTCAT CACGCTGCTC
AAAGGCTACC TGCACACGGG CGACGAGCGC TGCGCGCAAT GGTTCGAGCG CCTGCATGCA
TACACATGGA GCCATTTCCC TGATCCCGAA TACGGCGAAT GGTTCGGCTA TCTCAACCGC
CAGGGCCAGC CGCTGCTCAC CTTGAAGGGC GGTAAATGGA AAGGCTGTTT CCATGTGCCG
CGCGGGCTGT ACCAATGCTG GAAAACCCTG GAAGCCATTC AGGCCAAAGT AACCATGAAC
GTCTGA
 
Protein sequence
MQPEKYIEQY RRALLDDVIP FWMKNSPDRE SGGFFTCLDR DGNVFDTDKF MWLQCRQVWC 
FAMLYNQVEA RQEWLDMALS GAAFLQKFGR AQHNGPDGGA NSWYFSVDRH GNPLMQPHSI
FSDCFATMAF GQLYKATGRE EFKTIATDTF YDILKRQGNP KGIYNKGVPG ARPLESFALP
MILCNLVLEI EPLLEPALVD EVIQNGIDTV MNKFYRPELG VILENIAPDG SFSDSFEGRL
VNPGHGLESM WFIMDLAERT NDSQLAQKAV DIAIQLIEYG WDDEHGGIFY FMDIKGNPPQ
QLEWDQKLWW VHMETLITLL KGYLHTGDER CAQWFERLHA YTWSHFPDPE YGEWFGYLNR
QGQPLLTLKG GKWKGCFHVP RGLYQCWKTL EAIQAKVTMN V