| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5331 |
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| Symbol | |
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| ID | 8228942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6437576 |
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| End bp | 6439201 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644933176 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003089689 |
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| Protein GI | 255039068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0214505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.577233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATT CTAACATATT CATCATGAGA AACTTATCAT TCATTATACT CGCGTCGTTG
CTCGTGCTGG CTTCGTCGTG CTCCGACGAT TTCCTCGACC GCACGCCTCC GGGCAACCTC
ACCGACGAAA CATTCTATAA ATCGCCGGAT GCCGGTTTTA AATCGCTCGT AACCTGCTAC
CGCGGCTTTG TGAGCAACTT CTGGGGCTAC GAGGCGGCGC GCGCCGAACT AGGCAATATG
GCCACGGACG ATGCCGACAA AGGCGGTTCC GATGCCGGCG ACCGCCCATT CGTGACCGAC
CTCGGTTTTG GCCGTGCGCT GTCGTCCAAC GAAACACTGG CAGGTTACTG GACCGCGCGG
TACAGTGCCA TTGGCAACTG CAATGTGGCG CTGGAACGGC TGCCCGAAGC GAACCTTATC
GATGCGGGCG GCGCGCCGCT CAGTCCGGAG TTAAAGAGCC GGTACCTGGC CGAAATCCGC
TTTTTGAGGG CATTCTTCTA TTTTGAACTG GCGGAAGTAT TCGGCGGGGT GCCGCTGGTG
ACGAAAACGC TCACCGTCGA CGACCGCACG AAGCTCGCGA GGGCATCGGC AACCGAGGTT
TTCCAGTTTA TCGAAGCGGA ACTGACGGCC GTGGCCAACG ATCCGGCCAT GCTTTCGGCT
ACCAACCTGC AAGCTGCCGA GCTGGGCCGT GCCACCCGGG AGGCGGCCTG GGCGCTGCTG
GCGCGTACTT ATCTGTTTTT TGCCAAGGAC GATGCGGCGC TTTTTGCCAA GGCGCGTGAC
GCGGCCAAAA AGGTGATCGA CTCCGGTGCT TTTGCGTTAC ACCCTCAGTT TCAGGAGATA
TTCCTCGAAA ACGGGTATAA AACCAAGGAG GCCGTGTTTT CAATCATCAT GGGCGACGAT
CCGGCGGTCC CGATCATCGG GAGTACGATT AATGTGTATT GCTCGCCGCG TGGTGCTACC
GGTGGCTGGG GATTTGATTT GCCTACGCAA GACCTTGTCA ATGAGTTCGA AGCGGGCGAT
CCGAGGTTGC TGTTCACTGT GCTGCAATCC GGCGACGAAT TCCCGAAGCT GAATGGTACC
AAAGAAGTGC TCGACTTTTC GACCTATCCG AATACGGGCT ATCACAGTCG TAAAGTGTAT
CTGCCGGAAG CGCGTCGCGG CCAGGGCTGG GGCAATGATG CCTGGACGTA CCATCCGATT
CGCTATGCCG ATGTGCTGCT GATGTATGCC GAGGCATTGA TCGAAAGCGG CGGCGACAAG
GCAGAGGCCG TGAATTATAT CAACCAGGTG CGCAAGCGCG CGTCGGGCTC GCAGCGCAAG
GACGTGGAAG CAGCGTCACG CGTGTTGAAA GTGGCTGAAA AACCGCTCCC CGACATCAAA
ACAAGCGACG ACCTTCGCAA AGCCGTCCGC CACGAACGCC GTGTGGAGCT GGCCATGGAA
TACCACCGCC TGTTCGACCT TATGCGCTGG AACACACTCG TGCCGACCAT GAAGGCCTAT
TCGACCAAAC CACTAACAAA CGGCAAAGGA GGCAACTTCA CAGCCGGCAG AAACGAAATC
TTCCCAATCC CACAAATCGA GATCGACAGG TCAGGAGGAT CGATTGGGCA GAATCCGAAT
TATTAA
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| Protein sequence | MQNSNIFIMR NLSFIILASL LVLASSCSDD FLDRTPPGNL TDETFYKSPD AGFKSLVTCY
RGFVSNFWGY EAARAELGNM ATDDADKGGS DAGDRPFVTD LGFGRALSSN ETLAGYWTAR
YSAIGNCNVA LERLPEANLI DAGGAPLSPE LKSRYLAEIR FLRAFFYFEL AEVFGGVPLV
TKTLTVDDRT KLARASATEV FQFIEAELTA VANDPAMLSA TNLQAAELGR ATREAAWALL
ARTYLFFAKD DAALFAKARD AAKKVIDSGA FALHPQFQEI FLENGYKTKE AVFSIIMGDD
PAVPIIGSTI NVYCSPRGAT GGWGFDLPTQ DLVNEFEAGD PRLLFTVLQS GDEFPKLNGT
KEVLDFSTYP NTGYHSRKVY LPEARRGQGW GNDAWTYHPI RYADVLLMYA EALIESGGDK
AEAVNYINQV RKRASGSQRK DVEAASRVLK VAEKPLPDIK TSDDLRKAVR HERRVELAME
YHRLFDLMRW NTLVPTMKAY STKPLTNGKG GNFTAGRNEI FPIPQIEIDR SGGSIGQNPN
Y
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