| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5329 |
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| Symbol | |
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| ID | 8228940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6432809 |
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| End bp | 6433777 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933174 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003089687 |
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| Protein GI | 255039066 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000155161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.240283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAG ATCGCTTGCT GTATTTACTG GAAAACGACA AGAACGGGCA GAATTCGCCC
GCGGAGGCCG AGGAACTCGA AGCTTGGTAC CGCTCTGCGG AAGAGCGTCC GGCATTTACG
GCCGGGCTTT CGGCAAAGGG CTTGTCGGCC TTGGAAGATA AAATGTTTTT CAGGATTCAG
GCGACGGCTC TGGGTGAAGA GCAGCGGGTT GAGCCGGAGG GAAAAAGCCG CAGCTGGTTC
GGTTGGGGCA GGATTGCGGC GGCGGTGCTG TTTCTGATCG TCGCCGGGAT CGGAATATAT
ATGTTCCAGC GGCAGAGCGG ACGCATTGTA GAAAGGACTG CCTTTGGAGA AACCCGGTTG
ATCACATTAC CCGACGGCTC GGAAGTGACA TTGAACGGCA ATTCTGAGCT TTCGTACGAA
GCCGGGTGGC CCGCGCTGCG GGAAGTGCGG CTGGATGGCG AGGCGTATTT CAATGTCGTG
CACACCTCCG ACCACCGGAA GTTCCGCGTG CGGACAGGCG CAGATTTCAG TCTGGATGTG
CTGGGAACCC AATTCAATGT CAGCAAGCGC AAAAGCGGCA CAAGGGTCGT GCTCGACGAG
GGCAAAGTGC AATGTAACCT CGGCGACGCC ACGGGCGATA CGCTCGTCCT CAAACCGGGT
GAAATGGTGC AATTCCGCAA GCCGGCGGAA TACCAGCGAT CGCACGTGGA AAAAGGCCTG
TATTCCGCCT GGAAAGATCA CAAACTGGTT TTCAAAAATA CCTCACTCCG CGAAGTAGCG
GCCATATTGC AGGATACTTA CGGCTTCGAA ACAGAAGCCA GTCACCCAGA TTTACTCGAT
CGGCAGATTT CCGGCTCCGT TCCGACGGAT AATGTGGAGC TGCTCCTGCA AGGCATCGCC
GAAGCGTCCT CCATTACCAT CACCCGAGAC GGCGACCAGC TTGTTATCGG TCCCAAGTCC
AATCAATAG
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| Protein sequence | MDKDRLLYLL ENDKNGQNSP AEAEELEAWY RSAEERPAFT AGLSAKGLSA LEDKMFFRIQ
ATALGEEQRV EPEGKSRSWF GWGRIAAAVL FLIVAGIGIY MFQRQSGRIV ERTAFGETRL
ITLPDGSEVT LNGNSELSYE AGWPALREVR LDGEAYFNVV HTSDHRKFRV RTGADFSLDV
LGTQFNVSKR KSGTRVVLDE GKVQCNLGDA TGDTLVLKPG EMVQFRKPAE YQRSHVEKGL
YSAWKDHKLV FKNTSLREVA AILQDTYGFE TEASHPDLLD RQISGSVPTD NVELLLQGIA
EASSITITRD GDQLVIGPKS NQ
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