| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5328 |
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| Symbol | |
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| ID | 8228939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6432193 |
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| End bp | 6432735 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933173 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003089686 |
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| Protein GI | 255039065 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000188963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.140154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG GTGATAGCGA CGCTTTTGCT ACGCTGTACC GCAAATACTG GCGCCGTCTT
TTTGATGCCG CGTACCGGCG GATCATGCTG CGCGAGGAAT GTGAGGAGCT CATCCAGGAG
ATTTTCACCG ATCTCTGGAC GAAGCGCGAG ACGCTGCTCA TATCGGTCAC GCTGGAAGCT
TATCTTTTCG GTGCATTGCG GTACAGCATC TATAATATGA TCCGTTCGCG TAAAATCTGG
GAGGCGTATC TCGAACATTT ACTGCAAATG CCCGGTGATG CCGGCAACGA TACCGAGGAC
CGCCTGCACT ACGAGGAACT TGCGCTGGCG CTGGAAAACA GCATTCAGAA CTTGCCCGAA
AAACTGCGGA AAGTGTATCA GCTGAGCAGG AAGGAACATC TTACTTACAA GGAAATCGCC
GAGCGGGAGC AGATTCCGGT GGACACGGTC GAGAAACAAA TGGGCCGGGC CCTGAAAATC
CTGCGCGACA ATCTAAAAGA GTTTGCCTGG GCGTGGATCG TGCTGGAAAT GTGGGATTTG
TAG
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| Protein sequence | MKAGDSDAFA TLYRKYWRRL FDAAYRRIML REECEELIQE IFTDLWTKRE TLLISVTLEA
YLFGALRYSI YNMIRSRKIW EAYLEHLLQM PGDAGNDTED RLHYEELALA LENSIQNLPE
KLRKVYQLSR KEHLTYKEIA EREQIPVDTV EKQMGRALKI LRDNLKEFAW AWIVLEMWDL
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