| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5323 |
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| Symbol | |
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| ID | 8228934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6425618 |
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| End bp | 6427723 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933168 |
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| Product | putative bifunctional cbb3-type cytochrome c oxidase subunit I/II |
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| Protein accession | YP_003089681 |
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| Protein GI | 255039060 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I
[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0486329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.183371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATGAAT TTCAATACGA CAACCGCATT GTCCGGGACT TCGCTATCGC TACCATCCTT
TTCGGGCTTA TCGGTATGCT CGTGGGCTTG CTGGCGGCTT TGCAGCTCGT TTTCCCGAAC
CTCAATTTTG ACCTGCCGTT CCTGACGTTC AGTCGCATCC GGCCGCTGCA TACCAATGCG
GTGATTTTTG CATTTGTCGG AAACGGCTTC TTTACCGGGC TTTATTATTC CGTGCCGCGC
GTGCTGCGGA CGCCGATCTG GAGTCCGGCG CTGAGCCGCT TCCATTTCTG GGCATGGCAG
GCCATTATCC TCGGCGCGGC CATTTCGCTA CCCATGGGTT TCACCACCTC CAAAGAATAT
GCCGAGCTGG AATGGCCATT CGACATTGCC ATCGCCGTCG TGTGGGTTTC CGCATTGGTG
AACATCATTA TGACGACCAT CAACCGCCGC GTAGAGCACA TTTATGCCGC GGTATGGTTC
TACATCGCCT CCTTCGTGAC CGTGGCCATG CTGCACGTGG TAAACAGCGT GGAGCTGCCG
ATCTCTTTCA TGAAAAGCTA CTCGGTGTAT GCTGGTGTGC AGGATGCGCT CGTGCAATGG
TGGTACGGCC ATAATGCGGT AGCGTTTTTC CTTACGACGC CATACCTGGG TTTGATGTAC
TACTTTTTGC CCAAAGCGGC CAACCGGCCC ATTTACTCCT ACCGGCTTTC GATCGTACAC
TTCTGGGCGC TGATATTCCT GTATATCTGG GCAGGGCCGC ACCACTTGCT TTATACCTCG
TTGCCCGAAT GGGCGCAAAC GCTCGGTACG GTGTTTTCGG TGATGCTCAT CGCGCCGTCG
TGGGGCGGTA TGATGAACGG GCTCATGACC CTGCGTGGTG CGTGGGACAA AGTGCGCGAA
GATGTGGTGC TGAAATTCAT GGTGGTAGCG ATTACCGCCT ATGGAATGGC CACTTTCGAA
GGGCCGATGC TTTCGCTTAA AAACGTCAAC GCCATTGCCC ACTACACCGA CTGGATCGTG
GCACACGTAC ACGTAGGCGC GCTCGGCTGG AACGGCTTCC TGACATTCGG TATCCTTTAC
TGGCTGTTCC CAAGGTTATA CAACCGCCCG CTTTACTCTA CCAAAGCCGC CAATTTCCAC
TTCTGGATCG GCACGCTGGG GATCATCTTC TATACCATTC CCATGTATTG GGCGGGCTGG
GTACAGAGCT CCATGTGGAA GGAGTTTACA CAGGAAGGGC TTTTGAAATA CCCTAACTTC
CTCGAAACCG TTACGGCCCT CAAACCGCTG TATTTCCTCC GAAGCGTAGG CGGTACATTA
TATCTCGTGG GTTTTGTGGT GATGATTTAT AACCTCTGGA TGACGGCGCT GAAAGGCAAG
CTCGTCCCGA CAGAAACTGC CAAAGCAATG CCGTTGAACG CGATCTGGCA TGCCGAGAAG
AGCGAATACT GGCACCGCAG GCTGCTGGAA CGCAAGCCGC TCGCGCTGAC GATCTTCTCC
CTGGTAGCAG TTGCGATCGG CGGGATGATC GAGATGATCC CGACGTTCCT GGTCGAATCC
AATGTGCCTA CCATTGCGAG CGTGAAACCT TACACGCCAC TGGAATTGCA GGGTCGCGAC
ATTTACGTCC GCGAAGGCTG CTACGTGTGC CATACGCAAA TGATCCGTCC GTTCCGGTCA
GAGATCGAGC GGTTCGGGGA GTATTCCAAA TCGGGTGAGT TCGTGTATGA CCACCCGCAC
CAGTGGGGCT CCAAACGCAC CGGTCCGGAC CTGCAACGCC TGGGCGGCAA GTACCCCGAC
TCCTGGCATT ACAACCACAT GGAAGACCCG ACCTCCATGT CGCCCGGTTC CATCATGCCG
CGCTACGGCT GGCTGCTCGA AAACGATCTG GATACGACCA CGACCAAAGC GAAGATCAAA
GCCATGCAAA CGCTGGGCGT GCCTTACGAA AAAGGCTACG AACACCAGGC CAACGCCGAT
CTCGTGAAAC AGGAAAAGGA AATTCAGGAG CGGTTGAAGC AAAGCGGCAT CAAAACCGCA
GCCAACAAAG AGATCATCGC GCTGATTGCT TACATGCAGC GGCTTGGGAC TGATATTAAA
AAATGA
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| Protein sequence | MDEFQYDNRI VRDFAIATIL FGLIGMLVGL LAALQLVFPN LNFDLPFLTF SRIRPLHTNA
VIFAFVGNGF FTGLYYSVPR VLRTPIWSPA LSRFHFWAWQ AIILGAAISL PMGFTTSKEY
AELEWPFDIA IAVVWVSALV NIIMTTINRR VEHIYAAVWF YIASFVTVAM LHVVNSVELP
ISFMKSYSVY AGVQDALVQW WYGHNAVAFF LTTPYLGLMY YFLPKAANRP IYSYRLSIVH
FWALIFLYIW AGPHHLLYTS LPEWAQTLGT VFSVMLIAPS WGGMMNGLMT LRGAWDKVRE
DVVLKFMVVA ITAYGMATFE GPMLSLKNVN AIAHYTDWIV AHVHVGALGW NGFLTFGILY
WLFPRLYNRP LYSTKAANFH FWIGTLGIIF YTIPMYWAGW VQSSMWKEFT QEGLLKYPNF
LETVTALKPL YFLRSVGGTL YLVGFVVMIY NLWMTALKGK LVPTETAKAM PLNAIWHAEK
SEYWHRRLLE RKPLALTIFS LVAVAIGGMI EMIPTFLVES NVPTIASVKP YTPLELQGRD
IYVREGCYVC HTQMIRPFRS EIERFGEYSK SGEFVYDHPH QWGSKRTGPD LQRLGGKYPD
SWHYNHMEDP TSMSPGSIMP RYGWLLENDL DTTTTKAKIK AMQTLGVPYE KGYEHQANAD
LVKQEKEIQE RLKQSGIKTA ANKEIIALIA YMQRLGTDIK K
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