| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5318 |
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| Symbol | |
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| ID | 8228929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6420288 |
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| End bp | 6421652 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644933163 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003089676 |
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| Protein GI | 255039055 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.05938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGG ACCTGCTATT CAAATATAAC ATCCCGGGGC CACGGTACAC CAGCTACCCG
ACCGTTCCGT ACTGGCAGAA AACCCCTCCT GCCATTAGCA AATGGAAAGA ACTGGTGCGG
GATGCATTCA CGGTTTCAAA CCAAAAGGAA GGGATCAGTT TATACATCCA CCTGCCGTTT
TGCGAAAGCC TTTGCACCTA TTGCGGCTGC AATACACGGA TCACGATCAA TCACGCTGTT
GAAAGCAAAT ATATCCAGGC CGTTTTGAAG GAATGGAGCA TGTACTGCGA GCTGTTCGGG
GATGAAAAGC CGGTGATCCG GGAATTACAC CTCGGCGGCG GCACGCCTAC GTTTTTTAGT
CCTGAAAATC TGGTAAACCT CGTTAAAGGC CTGCTCGACA AGGCTTATGT GCATACCGAC
GCCCGTTTCG GCTTCGAAGC GCACCCCGGA AACACTACCG ACGCGCATCT GGAAGCGCTG
TATTCCGTCG GTTTCCGCAG GATCAGCATT GGCGTGCAGG ATTTCAACCC GGTGGTGCTG
GCGATGATCA ACCGGCACCA GACGTTCGAG CAGGTAAAAC ACCTCACGCT GAAAGCCCGC
GAAATCGGCT TCACGTCCGT CAACTATGAC ATTGTGTACG GATTGCCGCA GCAGAAAAAC
TGCTCGATGA TGCAAACCAT GCTGCGCGTG ATCCAGCTCC GCCCCGACCG CATTGCATTT
TACAGCTACG CGCATGTGCC CTGGATCAAA CCCGGCCAGC GGAGCTACAC GGAACAGGAT
TTGCCCGATG CCGATCACAA GATGGCGATT TACGAAGCCG GCCGCAGCGC GCTGGAACTG
GCGGGTTACG AGGATATCGG CATGGACCAT TTTGCACTCC GCACCGACGA GCTCTATAAG
GCATCCACCG AGGAGCGCCT TCACCGGAAT TTCATGGGCT ATACCGACAC CCGCACGCAG
CTGCTGATCG GCCTGGGCGC ATCGTCCATT TCCGATTCGT GGTGGGGCTA TGCCCAAAAT
GAGAAGAAAG TAGAAGATTA CTACAAAAAA CTCGCCGCCG GCGAACTGCC GGTATTCCGC
GGCCATGAGC TGAGCCGCGA AGACCTCATC ATGCGAAAAC ACATTCTCCG CCTCATGACC
GGTTTTGAAA CTTCCTGGGC CAGCACGTCG GAAGTGTGCA TGGAAGTATA TCAGGCCCTC
GAAAGATTGT CGGAAATGGA GTTCGACGGG CTCGTTGAAG TGGAGCCTTT CCGCCTGAGG
ATCACAGAAA AAGGCAAGGC TTTCGTGCGC AATGTGTGCA TGGCATTCGA CGCCCGTTTA
TGGACGGATT TACCTCAAAC CACGCTATTC AGCCAAACAG TTTAA
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| Protein sequence | MDKDLLFKYN IPGPRYTSYP TVPYWQKTPP AISKWKELVR DAFTVSNQKE GISLYIHLPF
CESLCTYCGC NTRITINHAV ESKYIQAVLK EWSMYCELFG DEKPVIRELH LGGGTPTFFS
PENLVNLVKG LLDKAYVHTD ARFGFEAHPG NTTDAHLEAL YSVGFRRISI GVQDFNPVVL
AMINRHQTFE QVKHLTLKAR EIGFTSVNYD IVYGLPQQKN CSMMQTMLRV IQLRPDRIAF
YSYAHVPWIK PGQRSYTEQD LPDADHKMAI YEAGRSALEL AGYEDIGMDH FALRTDELYK
ASTEERLHRN FMGYTDTRTQ LLIGLGASSI SDSWWGYAQN EKKVEDYYKK LAAGELPVFR
GHELSREDLI MRKHILRLMT GFETSWASTS EVCMEVYQAL ERLSEMEFDG LVEVEPFRLR
ITEKGKAFVR NVCMAFDARL WTDLPQTTLF SQTV
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