| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5317 |
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| Symbol | |
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| ID | 8228928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6418980 |
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| End bp | 6420245 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933162 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003089675 |
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| Protein GI | 255039054 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.100222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATA CGGATATTTT AATTCATACG CAGGTGATGA CACGGCATAT CGAGATGCTG
GATGCCCTGT TCAAACACGC GACCGAAGGG ATCGTGGTGG TGGACAAACA GGCAAACATT
GTAATGCTTA ACCCCAAAGC GAAGGAGCTT TTCGGTTACA CCGATCGCGA GCTGATCGGC
CGGAAAGTGG AAACGCTGAT CCCCCAACGG TTTAACAGAA ACCACGTGGG CTACCGCGAC
GAATACCTGG AAGCGCCCAG GGCGCGCGGT ATGGGACATA TGATGGACCT TTTTGCCCGG
CGCAAAGACG GCTCCGAGTT CCCGGTGGAA GTGAGCCTGA GCCCGTTCAA AACCAGCGAC
GGCGAATTCG TCGTGAGCTT TGTGATTGAC ATTACCGAGC GTAAAAAGCA GGAAAGCCGC
ATTATCGAGG CGAACCTGGA AATACAAAAA CTGAATGCAG AACTGGAAGA ACGCGTGCAG
CAGCGTACGG AAGAACTGGC CGCGGCGATC AAGCGCATTG AGCAGTCGCA GGAAGAGGTG
GTGCGTGCAC TCACCAAGGA GCGCGAGCTG AACAATATGA AGAGCCAGTT CGTGACAATC
GCCTCGCACG AGTTCCGTAC ACCGCTGGCG ACTATTCTGT CGTCGGCCTC GCTCATTGGC
CGCTACGCCC GCACCGAGGA CGAAGAAAAG CGCCAGAAGC ACGTCCAGCG CATTAAATCC
ACTGTTACCA ACCTCACGGA GATCCTGAAC GACTTCCTGT CCATCGGCAA GCTGGAAGAA
GGCCGAATCC ACGCCATTCC CGTGCTCACC GACCTGAATG AGTTTTGTAA AAACCTGATC
GAAGAGATTA AGGGACTTTG TAAGGAAGGG CAGCAAATGA ACTTCACCTA CGAAGGCGAA
GCCCATGCCT GGCTCGACAA GCAGCTCCTC CGCAATGTGC TTTTTAACCT GCTTTCGAAT
GCGATCAAAT ATTCGGAAAT GGGTAAATCC ATTTTTCTGA GGATCAAAAA CTGGGGCGGG
CTGATCCGCA TTGAAGTGCA GGACCAGGGC ATCGGTATTC CCGAGAAAGA CCAGGGACAC
ATTTTCGACC GTTTTTTCCG CGCCCACAAT GCGGGCAATG CGCAAGGCAC CGGGCTGGGA
CTCAACATTG TACAAAACTA CATCGAGCTC ATGGGCGGCA CCGTGCGCTT CCAGAGCGAA
GTGAACACAG GCACCACATT CTTTGTGGAG CTGCCTAACC GCGAACCCAT TAAAATCGAC
TCCTGA
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| Protein sequence | MFDTDILIHT QVMTRHIEML DALFKHATEG IVVVDKQANI VMLNPKAKEL FGYTDRELIG
RKVETLIPQR FNRNHVGYRD EYLEAPRARG MGHMMDLFAR RKDGSEFPVE VSLSPFKTSD
GEFVVSFVID ITERKKQESR IIEANLEIQK LNAELEERVQ QRTEELAAAI KRIEQSQEEV
VRALTKEREL NNMKSQFVTI ASHEFRTPLA TILSSASLIG RYARTEDEEK RQKHVQRIKS
TVTNLTEILN DFLSIGKLEE GRIHAIPVLT DLNEFCKNLI EEIKGLCKEG QQMNFTYEGE
AHAWLDKQLL RNVLFNLLSN AIKYSEMGKS IFLRIKNWGG LIRIEVQDQG IGIPEKDQGH
IFDRFFRAHN AGNAQGTGLG LNIVQNYIEL MGGTVRFQSE VNTGTTFFVE LPNREPIKID
S
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