| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5313 |
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| Symbol | |
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| ID | 8228924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6413375 |
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| End bp | 6415507 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933158 |
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| Product | histidine kinase |
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| Protein accession | YP_003089671 |
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| Protein GI | 255039050 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0905538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA TCCCTTTGCG CCCGTTGTCC CGGGCATTGT TTATCTGGAC TATCCTGCTC
GTAGTCATAC TGGGATCGTT CGTGTTTGTG ATCTTGCTGA CGCGCGTCAA ATCGCAGACG
ATCCGGCAGA ATATCCAGGA GCTCAGCAAA GACGTGAACG GCTACCAGAG GATCGATACC
TGCATTTCAT TGCTGTATGT GGCCGAAAAC AACAGCCGAT TATTCATCAT CACGCAGGAT
TCGGCCTATT TCCGCTCCTT TACCAGTCAG CTGCAAACCG TTTCCAATAT CCTTACCGAG
TTTGAAACCG AGCGCAATCA CCGGCCATCC GCATTATCGG GACTGGTGGA AAGCAAGCGC
GAGCGCAACG ACGAGTTTAT CCGGATGAAA ATCCTCGTCG ACAGCCTGTT CGCGCTCTCC
GTGCAGCGCA GCGAGCAGGG CGGGCAGGAA CCGGCCCCGC AGCGACCGGC GATCAAGGTC
AAGAAGACTT CCAAAGTCGA TTCGGTGATC GTGGAAGACC CTCAAAAGAA AAAGCGGGGC
CTTTTCAAGC GGATCGCCGA CGCGATTTCC AACAAGGGCG ACAACGACGT AACCAAGGAA
AAAACGAAAG TCATCATCCA GCGCGACTCG CTGATCATCC CTCCAATGCT ACCGCGGGAC
CTCGATCTGA GCCGTTATGA AGAATACAAC CGCGTAAAAA GGCAGCTCAA CGACGCGGAG
CGGCGGTTGC TTTTTCTGAA CGGAGAGCTT TTTGCGAACC TGCAATTGAC GCTCAAAACG
CTGAAAGCCG CCGAAGAGGA GAAAGCAAGG GCAGTCCGAC GTTTGCTGCT ATCCGAAACC
TCCGACGAGT TTGAAGAAGT AAACCTGCTT TTCTGGGCCG GGGCTATGGT GGTGATGCTG
ATGACGATCA TCATCATCCG AAACCTCGTG AAACTTTACC GCAACGACGT CACCATTGTC
CGGTACGCCT CCATGGCCAC CGAGGCCGCG AAGCAGAAGG GTGAATTCCT CGCGCAGGTC
ACGCACGAAA TTAGGACGCC GCTCAATGCG ATCATCGGGT TTTCGCAGCT GATGGACACC
CAGCGCCTCG ACGGGCAGGA AAAAGAAAGC GTGGACGCCA TCCAGAGTTC GTCCCGCATA
TTGCTCACCC TGGTGAACGA CCTGCTCGAT TTCTCCAAAC TCGAAAGCGG AAAGCTGACA
TTGCAATACC AGCCATTCAA CCCGGTGGAT GCGGTGAACG AGGTGGTGGC GCTTATGCGC
GTGCTGGCCA GCGAAAAGAA CATCGAAATT GAACCGAAAA TCGCCATCGG AAACCGGGTA
TGCCTGCTGG GCGACGAGTT CAGGGTCAAG CAGGTGGTGA TCAACCTGCT CAGCAATGCG
ATCAAATTCA CGCCTGCCCG CGGGAAAGTG GTGGTGGAAG CCAGCCTCGA CCAGTCCGAA
GGGCAAAAGA AATGTTTGAA GATCAGGGTA AAAGACTCCG GGATCGGCAT TGCGCCGGAG
CATCTCAAGG AAATATTTGA GGATTTCAAA CAGATCGGCG CCGCCTCGGC GGGGAAGCCG
GGAACCGGGC TCGGGCTGGC AATCTGCAAG CGCATTGTGG AGCTGCATGG CGGAAAAATC
TCCGTCGAAA GCGTCGTGGG CAAAGGTTCG GAGTTCAAAA TAGGTATACC GATGACCGTA
GCCGAAAAGG CGAGCGCGCC GCCGCAGGTC CGCAGCACTT TGCCGGAGGT TTCTCTGGCG
GATTTTAAAG GTAAAAAAGT GCTGGTGGCC GACGATACCA AGCTGAACCT GGTGTTAATG
AGCAGGTTGC TGGAAAAGCA TGGACTGGCA TTTGACCTGG TAGGTTCCGG CGACGACGCC
CTCGATCGCT TTGAAAGCGG GCATTACGAC CTCGTTATCA CCGACATTCA CATGCCCGGC
ATGGACGGCA CCGAACTTAC GCGTCACATC CGCCGCAGCA CCGACCCGAC GAAGGCCGCC
ATACCGGTGA TCGGTTTCAC CGGCGACCTT TCCGACCGCG ACAAGGATTA CTACGCAGCC
CTCGGGATCA GCGGTGTTTT GAACAAACCA TTCTCGGAAA AGGAATTCCT GACCGTGCTC
AGCCACGCTT TCGGCACGCA GGGAACCCGA TAA
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| Protein sequence | MMKIPLRPLS RALFIWTILL VVILGSFVFV ILLTRVKSQT IRQNIQELSK DVNGYQRIDT
CISLLYVAEN NSRLFIITQD SAYFRSFTSQ LQTVSNILTE FETERNHRPS ALSGLVESKR
ERNDEFIRMK ILVDSLFALS VQRSEQGGQE PAPQRPAIKV KKTSKVDSVI VEDPQKKKRG
LFKRIADAIS NKGDNDVTKE KTKVIIQRDS LIIPPMLPRD LDLSRYEEYN RVKRQLNDAE
RRLLFLNGEL FANLQLTLKT LKAAEEEKAR AVRRLLLSET SDEFEEVNLL FWAGAMVVML
MTIIIIRNLV KLYRNDVTIV RYASMATEAA KQKGEFLAQV THEIRTPLNA IIGFSQLMDT
QRLDGQEKES VDAIQSSSRI LLTLVNDLLD FSKLESGKLT LQYQPFNPVD AVNEVVALMR
VLASEKNIEI EPKIAIGNRV CLLGDEFRVK QVVINLLSNA IKFTPARGKV VVEASLDQSE
GQKKCLKIRV KDSGIGIAPE HLKEIFEDFK QIGAASAGKP GTGLGLAICK RIVELHGGKI
SVESVVGKGS EFKIGIPMTV AEKASAPPQV RSTLPEVSLA DFKGKKVLVA DDTKLNLVLM
SRLLEKHGLA FDLVGSGDDA LDRFESGHYD LVITDIHMPG MDGTELTRHI RRSTDPTKAA
IPVIGFTGDL SDRDKDYYAA LGISGVLNKP FSEKEFLTVL SHAFGTQGTR
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