Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5306 |
Symbol | |
ID | 8228917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6405290 |
End bp | 6406216 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644933151 |
Product | hypothetical protein |
Protein accession | YP_003089664 |
Protein GI | 255039043 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.939469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0565222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAGGT TCATCGACCC GCTCTCTGAT TTCGGTTTCA AACGAATTTT TGGCTCGGAG GCCAATAAGG ACATACTTAT TGATTTCCTC AACGTGCTTT TCGCCGGTGA AAGGCTGGTG GCCGATCTGA CATTCGCTTC AAACGAGAAC AATGGCCGGA TACCGATCCT CCGCCGGGCT ATTTTCGATT TGTGCTGCAC GGGAGCCGAT GGAGAACAGT TCATCATTGA AGTGCAGCGC GTGCGGCAGG AATATTTCAA AGACCGGTGC CTGTACTACT CCGCATCCCT GATCCGCGAC CAGGTGGAAG CAGGTGGTAC CAATTGGAGG TACGACCTGA AACCGGTGTA CCTGATCGGC TTAATGGATT TTTGTTTTGA AGATTCGGAT GACGGTCACT ATTTGCATGA AATCCGGTTG ATCAAGAGAA GCAACGGCCA GGTGTTTTAC GACAAGTTTG GTCTCACATT CATTGAAATG CCTGCTTTCC AAAAAAAGGA ATCGGACCTT TCGACCGAGC TGGACAGGTG GCTGTATTTG TTGAAAAATT TGAGTAAATT GAATATCGTT CCGCCGGTTT TGACAAATCC TGTTTATCAA AAAGTTTTCA GAGTAGCAGA AGTTTGTAAC CTAAATAAAG AAGAAAAAAT GGCTTGGGAT GCATATTTAA AAGCAAAATG GGACAACGAG AATTCCATGG ACTACGCAAA GAAGGAAGCG ATGCGGGTAG GGCATGAAGA GGGGCATAAA GAGGGGCATA AAGAGGGGCA TAAAGAAGGT ATGAAGGAAG GCATTAAAAA AGGTCGCGAA ACCGGCATAG AGCTCGGCAA ACGCCAGGTG GTGAAGAACA TGCTAGCCAA GGGCTTTGAC ATGCAGACGA TCTCCGATAT TACCGGCCTG ACGTTCGAGC AAATACGGAA TGCCTGA
|
Protein sequence | MGRFIDPLSD FGFKRIFGSE ANKDILIDFL NVLFAGERLV ADLTFASNEN NGRIPILRRA IFDLCCTGAD GEQFIIEVQR VRQEYFKDRC LYYSASLIRD QVEAGGTNWR YDLKPVYLIG LMDFCFEDSD DGHYLHEIRL IKRSNGQVFY DKFGLTFIEM PAFQKKESDL STELDRWLYL LKNLSKLNIV PPVLTNPVYQ KVFRVAEVCN LNKEEKMAWD AYLKAKWDNE NSMDYAKKEA MRVGHEEGHK EGHKEGHKEG MKEGIKKGRE TGIELGKRQV VKNMLAKGFD MQTISDITGL TFEQIRNA
|
| |