Gene Dfer_5306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5306 
Symbol 
ID8228917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6405290 
End bp6406216 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content47% 
IMG OID644933151 
Producthypothetical protein 
Protein accessionYP_003089664 
Protein GI255039043 
COG category 
COG ID 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.939469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0565222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGT TCATCGACCC GCTCTCTGAT TTCGGTTTCA AACGAATTTT TGGCTCGGAG 
GCCAATAAGG ACATACTTAT TGATTTCCTC AACGTGCTTT TCGCCGGTGA AAGGCTGGTG
GCCGATCTGA CATTCGCTTC AAACGAGAAC AATGGCCGGA TACCGATCCT CCGCCGGGCT
ATTTTCGATT TGTGCTGCAC GGGAGCCGAT GGAGAACAGT TCATCATTGA AGTGCAGCGC
GTGCGGCAGG AATATTTCAA AGACCGGTGC CTGTACTACT CCGCATCCCT GATCCGCGAC
CAGGTGGAAG CAGGTGGTAC CAATTGGAGG TACGACCTGA AACCGGTGTA CCTGATCGGC
TTAATGGATT TTTGTTTTGA AGATTCGGAT GACGGTCACT ATTTGCATGA AATCCGGTTG
ATCAAGAGAA GCAACGGCCA GGTGTTTTAC GACAAGTTTG GTCTCACATT CATTGAAATG
CCTGCTTTCC AAAAAAAGGA ATCGGACCTT TCGACCGAGC TGGACAGGTG GCTGTATTTG
TTGAAAAATT TGAGTAAATT GAATATCGTT CCGCCGGTTT TGACAAATCC TGTTTATCAA
AAAGTTTTCA GAGTAGCAGA AGTTTGTAAC CTAAATAAAG AAGAAAAAAT GGCTTGGGAT
GCATATTTAA AAGCAAAATG GGACAACGAG AATTCCATGG ACTACGCAAA GAAGGAAGCG
ATGCGGGTAG GGCATGAAGA GGGGCATAAA GAGGGGCATA AAGAGGGGCA TAAAGAAGGT
ATGAAGGAAG GCATTAAAAA AGGTCGCGAA ACCGGCATAG AGCTCGGCAA ACGCCAGGTG
GTGAAGAACA TGCTAGCCAA GGGCTTTGAC ATGCAGACGA TCTCCGATAT TACCGGCCTG
ACGTTCGAGC AAATACGGAA TGCCTGA
 
Protein sequence
MGRFIDPLSD FGFKRIFGSE ANKDILIDFL NVLFAGERLV ADLTFASNEN NGRIPILRRA 
IFDLCCTGAD GEQFIIEVQR VRQEYFKDRC LYYSASLIRD QVEAGGTNWR YDLKPVYLIG
LMDFCFEDSD DGHYLHEIRL IKRSNGQVFY DKFGLTFIEM PAFQKKESDL STELDRWLYL
LKNLSKLNIV PPVLTNPVYQ KVFRVAEVCN LNKEEKMAWD AYLKAKWDNE NSMDYAKKEA
MRVGHEEGHK EGHKEGHKEG MKEGIKKGRE TGIELGKRQV VKNMLAKGFD MQTISDITGL
TFEQIRNA