Gene Dfer_5291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5291 
Symbol 
ID8228902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6384711 
End bp6386921 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content49% 
IMG OID644933136 
Producthypothetical protein 
Protein accessionYP_003089649 
Protein GI255039028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.775862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACG ATCTCAATCT CGATGCATTA GAAGCGGCGT TTCGTGACCC TCTGGATGGA 
TGGCTAAGTG AAGGATATGA CTTGGTGCTT GTCGACTATG ATGATGCGCG AGCGGCAATT
GAAAATAATG CACAAGTTTT GAAAGCTGTT ATACAGCACG TCAACTCCAT TAAACAAGGC
AATATTGATA ATGTTGTTAT AGGTGCCAGT ATGAGCGGAC TTGTCGCTAG ATACGCAATC
CGAAAAATGG AGGTCGACGG AATCCAGCAT CATGTAATGC TGCTAATATG TTTTGACACC
CCGCATCAGG GAGCCAATGT ACCCGTTGGT ATGACCCAGC TTCTTTGGGA ATCAAGCCCT
ACTCTTTTGA CCAAGGTGGT TTTGAAGTTT TTTGCGAAGG GATGGCGCAA CTATTACAAT
GCAATGTTAA CTCCCGCTGC TTCTCAAATG CTGATGCATT GGGGCGGAGC TTTGACCGGA
GGTGTAGGAT CGAAATCACC AGCTTTTGAC GCATTTCGAA CGAATCTCTT TAACCTCGGA
AATGGCGGCT ATCCCGCGAA TTGCCGAAAT ATAGCAGTGA TTAATGGCAG TATGACTGCA
CAAGAAAATC CTCAATTAGC TGGTTACAGC TATGGAAGCA GGATATTAAG AAGCTGGACA
CCTTTCGGTT TACAGAACAG TAATATTGAT GTGCACACAA ATGTCCCTGG ACAAAATACC
AATGTTTGCC GATTTGCCAC GTGGGGTATA TTTGCTAAAC GGATTGGCGT TGCACGCAGC
TACAACAGCC CATTCAACGA CGACTTTTTG CCCGGGGGCA TCACATCTTC CTCTGTGCCA
AACAAGCTAT TCTCGGAAAC ATCTACTTTT CCATTCTGCT TTGTCCCCAC GTTTAGCTCC
ATTGATTACT CGGGGCCGGT AAACACTCAA GATCAGCGAA AACTACTGAA TGTAAATACA
GTAAATGCCG TGAATGGCCC GGCAAGGCAA ACGCCATTTG TACAGGTTTA CGGTAGAAAT
GAGAATAGCG CCCACATTAA CGCGCGCATT CACGATTGGA CGGCCATCGG CCAGTCCGAA
AACCTCCTCA CAGGCACCAC CACCTGTCCT GCACTCCCTA TCCCGCCCCA GCCTATCATC
TCCGTTTACA ATGTTTGCTA CCCGTTCAAT CAAGACCGGA CGACGGAAGG GAATACGGCT
AACATTAGTG TTTCGCTCGC TACGCCATCG GGTGGCCAGT ATGTTCATAA CTGGCTGATA
CTTCCTACTC AGCAAACATT TACGACTACC GGAGATCAGA TTACTTTTCA GGCTGAACAT
CCTGGCCAGT ATCAGGTCAT TTGTACGCGC ACCTATCCCA ATCGGAGGGA TTTGGAGTCG
ACGCACGATG TGACGTTTAA TGTGACCAAT TGCGGAGATC CGCTCACACT GCCGCAAAAC
CCGCAGATCC CGCCGCAAAT CGATCCGGAT ATCAGCATTT TCGATATTTG GGAAAACGAC
TTTTTGCTAA CCACGCCCAA ACCGGATTCA GTTGCCGTAT TTGCGCATTA TGAAGGGACG
CTTCCTGCGA TTTTGTATGC GGCCAGAGCC GACGGGACGT TCGTGCCCGC CAGCCAGCTG
CAAGCCGCAG GCATGTTTCC GGAATTTGTG CAGCTGTTTG CAGAAGCCGA CCCGCGTGAC
CCGTTGCCTG TTACGCTTTC GGAATTCAAC GTCAAACACG AAGGTGCGGC AAACCTGCTG
GAATGGACGA CTGCCAGCGA AATGAATAGC GATCATTTTG AAATCGAATG GAGTGCGAAT
GCAAAGAACT GGACGAAAAT CGGCGAGGTC GCTGGCGTGG ATGCAGGCAT CGCAACCACC
CATTACACGT TTTCAGACCA AATCAATCTC CCCGGAATTA CGTATTACAG GCTGAAAATG
ATTGACCGAG ACAATACCTT CACGTACAGC CGCGTCCGCT GGGTCGAGTC GGGCGAGACT
GAAATCGTCG CTTTTCCCAA CCCGCTTACA CCGGATGAGC CATTTTCATT AAAGACAGAA
AATAAAGAGA TTCTGCGAAT CGCTTTCTTC GATTTTTCGG GGAAAGTCGT GCTGGAAACA
GACCGTCTGC CCGTTCAAAT GCAACTGCAA CAACTCACAG CGGGGCGCTA CCTCATGCGG
GCGGTGTTTA CCGACGGCAC CGCAGCCAGC CAGGTCGTCA TCAAGCCCTG A
 
Protein sequence
MGNDLNLDAL EAAFRDPLDG WLSEGYDLVL VDYDDARAAI ENNAQVLKAV IQHVNSIKQG 
NIDNVVIGAS MSGLVARYAI RKMEVDGIQH HVMLLICFDT PHQGANVPVG MTQLLWESSP
TLLTKVVLKF FAKGWRNYYN AMLTPAASQM LMHWGGALTG GVGSKSPAFD AFRTNLFNLG
NGGYPANCRN IAVINGSMTA QENPQLAGYS YGSRILRSWT PFGLQNSNID VHTNVPGQNT
NVCRFATWGI FAKRIGVARS YNSPFNDDFL PGGITSSSVP NKLFSETSTF PFCFVPTFSS
IDYSGPVNTQ DQRKLLNVNT VNAVNGPARQ TPFVQVYGRN ENSAHINARI HDWTAIGQSE
NLLTGTTTCP ALPIPPQPII SVYNVCYPFN QDRTTEGNTA NISVSLATPS GGQYVHNWLI
LPTQQTFTTT GDQITFQAEH PGQYQVICTR TYPNRRDLES THDVTFNVTN CGDPLTLPQN
PQIPPQIDPD ISIFDIWEND FLLTTPKPDS VAVFAHYEGT LPAILYAARA DGTFVPASQL
QAAGMFPEFV QLFAEADPRD PLPVTLSEFN VKHEGAANLL EWTTASEMNS DHFEIEWSAN
AKNWTKIGEV AGVDAGIATT HYTFSDQINL PGITYYRLKM IDRDNTFTYS RVRWVESGET
EIVAFPNPLT PDEPFSLKTE NKEILRIAFF DFSGKVVLET DRLPVQMQLQ QLTAGRYLMR
AVFTDGTAAS QVVIKP