| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5289 |
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| Symbol | |
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| ID | 8228900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6381217 |
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| End bp | 6383979 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933134 |
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| Product | cytochrome c class I |
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| Protein accession | YP_003089647 |
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| Protein GI | 255039026 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.825886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACT TTTTCAAGTA CCCGGGCAGG CAATGGGGTG TTGCCTTGCT GAGCGGCATT
ACCCTGACCT CGGTTCTCCT GACCGGCTAC ACCTACACCC GCAACACCGC CTCCGACCGC
CCCGATTCGT TACAACTGGC GTCATTCGTC GAGCCCGGTT TTCCTTACAT TTCCACATCG
GTAGACGCCC GCAAGCTTGG TGGCGGATTC CCGAAAGATA ACCAGGCGGC CCGCACGCTC
GCATTGCAGC TGGGCGACAG CGCCTACGCC TGTTTCGACA CCGACCTGCT GCGCTGGTCG
GTGGCGTGGA CCGGCAAGTT TTTACCGATG GTGCTGATGG CCCAGGTTTC CTACAAGGAT
TTTTTTAATA AAAACAACAA CATTGCCACT GTTACCGGCA CACCCGTGCT GGCAACCGGC
GCTTACGCAG GCTGGACTAC CGGCAAGCCG TCCTACCGCA CCGACCAGTC GCTTCCGCCC
ACCTGGAAAC CGCTTCCTGC GGGACAGGGA CGGTACAATG GCGTGTATGT GTACGGCAAC
CGCTCCATTC TCGACTATTC GGTAGGGAAA GCGCGTATTT ACGAAATGCC CGGCAGCGCG
GAGTTCGACG GTCGGGTTGC ATTCACAAGG ACCATCCGGG CCAGCGACGT TACCGAAGAA
TTATTTCTGA CAGCCGCTGA AATTGATAAT GCTACCGGAA GCGAAATCAA AGGACGCATT
GCTTATGTGT ACCAGGGTGC CGGCAAAGAC ACGGTTACGG CAGTGGCCGT TTTGGGTAAA
GGGAAGCCTG CATGGCAGCC AGGGATCGAG GAAGGAAAAT ACCTTACCGT GCACGTTGCC
GCGGGTGGAG ATGCCACTGT GGCTATCTGG AAGGGCCTTT CGAAGGATAA AAAGGCATTC
GAGAAGTTTT GTAAAACTAA ACCTGCCGCA TTGCCCGACT TCCAAAAGGG CGGTCCGGCA
TTGTGGAAAG AGGCGGTTGC TACGCAAGGA AAACTTTCAC CTGACACCGC AGCTTTCGTA
ACCGATCAGT TGGCATTGCC CCTCAACAAT CCGTGGAAAA GAAATGTGCG TGTGGCTGAC
GTGGGCTTTT TTAAGGACGG AAGAGCCGCG GTGGTGACAT TTGAGGGCGA CGTCTGGACA
ATCGACGGCA TTGATAAAAA TTTGCAAAAC ATCCGGTGGC GGCGCTTCGC ATCCGGACTT
CATGAACCGA TGAGCATCGA GATCGTGAAG GACAATATTT ATGTGTTCGA CAGAAACGGG
ATTGTCCACC TCCGCGACCT GAACAACGAC GGCGTGGCCG ACTACTACGA AAACTTTTCG
AATGTGATGA CGCAATCCGC CGAGTCGCGC GAGTGGGCGG CGGACCTGGT TACGGCGCCG
GACGGCAGTT TTTACATTGC CAAGGGCGGG AGCCTCAGCA ACGGGCCCGG CATGACGAAG
GCGACGGGCA AAGGTTTCAG GGCCGGTTCG GAGCAGAACG GGACGATCGT GAAAATTTCG
CAGGATGGCC GCAGCTCGGA AGTCATAGCG ACGGGTTTAC GCGGGCCTTA CCTGGGCATC
CATCCCACAA AAGGCATTCT TACGGCCTCC GATCAGCAAG GTAACTTCGT TCCTTCGACC
CCCATTTTTG TGATCCACAA AGGAGATTAC TTTGGTGTGG AACCGACACT GCACCGCAAA
GACAATCCGG CCGTAACGCC CCCGCTGACG TGGATACCTC ACAGCGTGGA CCGTTCGGCG
ATCAGCCAGG CCTGGGCTAC CAGCACCAAA ATGGGCCCTT TGAATGGTAA CCTGATCCAC
TTTTCGTTTG GAAGGCCGGG GTTGTTCCGC GTGCTGATAG ACAGCACCAC GAGTGTGGTA
CAAGGAGGCG TGTCGGTGAT TAATGCCAAT TATCCTGCGC CCACTTCAAA GGGAGCAATG
AACCCGGCGG ATGAGCAAAT GTACGTTGCC GGTTTCAATC TGTGGGGGTC CAGCTCGAAT
GGTATCAGCG CATTGCTGAG GCTTCGTTAC ACCGGCAAGC CGAGCTACAT GCCCAACCAT
TTCAGGGCAG GCAAGCAGGG CATTATGCTG CGTTTCGATT CCCCGCTCGA TAAGGCTACG
GCCAGCGACC CCCGTAATTT CGAAGTGAGA AGATGGAACT ACAAACGCAC CGAGGAGTAC
GGCTCCGGAC ATTTTAAACC GGATGGCTCA ACGGGACAGG AAATTATGCA TGTGGCGGCA
TCGTACCCGT CGGCCGACGG TAAAAGCGTG CTGCTTCTGG TGCCCGAAAT GTCGGAAATC
ATGCAAATGG AGGTTACCTA CCATGTAAAG GCGGCCGACG GTAAAAAAAT CGACGACCAG
TTCTGGTTTA CGGTAAACCA ATCGACCGAC ATTGATTTGA AGGGATTTGA AGGCGTGGAC
CTGGCATTGC TGACTGCGAA ACGCCCCGAA GCGGCGACGG TAGCCGTGGC CGAAACGGCT
GCATCGGCGG AAAAGGGGCG GGAGATATTT CAAAAAATGG CATGCGCCGG ATGTCATTCG
GAAGGTACGC GCACGAAAGG CATGTACGGC CCGCCGTTCC AGAACCTCTA CAAATCGGAG
CGTCATTTCG ACGACGGCAG CAAGGTGATT GCCGACGAGG CATACCTGCG AGAATCGATC
CTGATGCCTT CGAAACGGAT TGTAAAAGGG TATAACGAGG AAATGCCGTC GTTTGTAGGC
GTGCTGTCCG ACAATGATAT CGAATCTGTG ATTTTGTATA TCAAATCACT TTCCGGGAAA
TAA
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| Protein sequence | MLNFFKYPGR QWGVALLSGI TLTSVLLTGY TYTRNTASDR PDSLQLASFV EPGFPYISTS
VDARKLGGGF PKDNQAARTL ALQLGDSAYA CFDTDLLRWS VAWTGKFLPM VLMAQVSYKD
FFNKNNNIAT VTGTPVLATG AYAGWTTGKP SYRTDQSLPP TWKPLPAGQG RYNGVYVYGN
RSILDYSVGK ARIYEMPGSA EFDGRVAFTR TIRASDVTEE LFLTAAEIDN ATGSEIKGRI
AYVYQGAGKD TVTAVAVLGK GKPAWQPGIE EGKYLTVHVA AGGDATVAIW KGLSKDKKAF
EKFCKTKPAA LPDFQKGGPA LWKEAVATQG KLSPDTAAFV TDQLALPLNN PWKRNVRVAD
VGFFKDGRAA VVTFEGDVWT IDGIDKNLQN IRWRRFASGL HEPMSIEIVK DNIYVFDRNG
IVHLRDLNND GVADYYENFS NVMTQSAESR EWAADLVTAP DGSFYIAKGG SLSNGPGMTK
ATGKGFRAGS EQNGTIVKIS QDGRSSEVIA TGLRGPYLGI HPTKGILTAS DQQGNFVPST
PIFVIHKGDY FGVEPTLHRK DNPAVTPPLT WIPHSVDRSA ISQAWATSTK MGPLNGNLIH
FSFGRPGLFR VLIDSTTSVV QGGVSVINAN YPAPTSKGAM NPADEQMYVA GFNLWGSSSN
GISALLRLRY TGKPSYMPNH FRAGKQGIML RFDSPLDKAT ASDPRNFEVR RWNYKRTEEY
GSGHFKPDGS TGQEIMHVAA SYPSADGKSV LLLVPEMSEI MQMEVTYHVK AADGKKIDDQ
FWFTVNQSTD IDLKGFEGVD LALLTAKRPE AATVAVAETA ASAEKGREIF QKMACAGCHS
EGTRTKGMYG PPFQNLYKSE RHFDDGSKVI ADEAYLRESI LMPSKRIVKG YNEEMPSFVG
VLSDNDIESV ILYIKSLSGK
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