Gene Dfer_5282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5282 
Symbol 
ID8228893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6375610 
End bp6375990 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content46% 
IMG OID644933128 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003089641 
Protein GI255039020 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACA ACCAATGGTA TTTAATAGAA ACGGAAGAGG AATATGAGGC GGCACTCAAC 
CGTTACGATC AGGTAAAGTT TGCTACAAAA GCTTCAACGT ATTACAGAGA GAAATTGCTG
CTGGTGCATC TGATCAGCGA ATATGAAGCA AAGCACAGCG CGCTTCCGGA AGTGGACCCG
ATCGAGCTCA TCAAAACCCG AATGGAAGAT TTCGGCTATA AACCCGCCGA CCTGGCCCAC
ATTTACGGCG ACAAAGGGAC TGTCAGTAAG GTTTTAAATT ACAAACAGGC CCTGTCGCTA
TCCATGATTC GCAAATTCGG CCAGTTTTTG CATATCCCTG CCGACCTGCT GATCCGAGAA
TATTCGTTAA AAAGCGTTTA A
 
Protein sequence
MEHNQWYLIE TEEEYEAALN RYDQVKFATK ASTYYREKLL LVHLISEYEA KHSALPEVDP 
IELIKTRMED FGYKPADLAH IYGDKGTVSK VLNYKQALSL SMIRKFGQFL HIPADLLIRE
YSLKSV