Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5282 |
Symbol | |
ID | 8228893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6375610 |
End bp | 6375990 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644933128 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003089641 |
Protein GI | 255039020 |
COG category | [K] Transcription |
COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACA ACCAATGGTA TTTAATAGAA ACGGAAGAGG AATATGAGGC GGCACTCAAC CGTTACGATC AGGTAAAGTT TGCTACAAAA GCTTCAACGT ATTACAGAGA GAAATTGCTG CTGGTGCATC TGATCAGCGA ATATGAAGCA AAGCACAGCG CGCTTCCGGA AGTGGACCCG ATCGAGCTCA TCAAAACCCG AATGGAAGAT TTCGGCTATA AACCCGCCGA CCTGGCCCAC ATTTACGGCG ACAAAGGGAC TGTCAGTAAG GTTTTAAATT ACAAACAGGC CCTGTCGCTA TCCATGATTC GCAAATTCGG CCAGTTTTTG CATATCCCTG CCGACCTGCT GATCCGAGAA TATTCGTTAA AAAGCGTTTA A
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Protein sequence | MEHNQWYLIE TEEEYEAALN RYDQVKFATK ASTYYREKLL LVHLISEYEA KHSALPEVDP IELIKTRMED FGYKPADLAH IYGDKGTVSK VLNYKQALSL SMIRKFGQFL HIPADLLIRE YSLKSV
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