| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5268 |
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| Symbol | |
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| ID | 8228879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6361616 |
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| End bp | 6363301 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644933114 |
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| Product | glycoside hydrolase family 39 |
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| Protein accession | YP_003089627 |
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| Protein GI | 255039006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCA GTTTACGGGT CACCATTCAG CTTCTTTTAA TATTTATCAC CGTTCTACCC
GCATTCGCGC AGCAGCCTGT GCGGGTGGAG GTCGATTTTG CCAAAAAGGT GGGGCCGATG
AATCCGGCCT GGGCGTGGTT CGGGTATGAC GAGCCCAACT ATACTTATAT GAAGGATGGT
AAGAAATTGC TGTCCGAAAT TGCGGCGCTG AGTCCCGTGC CGGTGTATGT GCGGGCGCAT
TGCCTGCTGT GTACGGGCGA TGGCACGCCG GCGCTCAAAT GGGGTTCCAC CAATGCCTAC
ACCGAAGATA GCCAGGGCAA GCCCGTTTAT AATTGGGCTA TTGTCGATAG TATTTTCGAC
ACCTACGTGC AAAGGGGCAT GAAGCCGCTC GCGCAGATCG GCTTTATGCC CGAAGCGCTG
TCGACCAACC CCACGCCTTA CCAGCACGAC TGGAAGCCCG GTGACCCTTA TTTTAAAATC
ATCACCGGCT GGGCCTACCC GCCAAAAGAT TATCAGAAAT GGACCGATTT GGTTTACAAT
TGGGTAAAAC ATTCAGTAGA ACGCTATGGC CAGAAAGAGG TGGAGAGCTG GTATTGGGAG
GTCTGGAACG AGCCGAATGG TTACTGGAAA GGCACGATGG AGGAGTTTTT CAAACTTTAC
GATTACTCCG CCGATGCGGT GAAAAGGGCA TTGCCTACGG CCCGCATTGG CGGACTGAAT
ATTGCCGGCA CTTCGGGCAA GACGGGCACG CAATGGCTGG AAGCATTCCT GAAACATTGC
GCGGAAGGGA CCAATTATGC AACCGGCAAA ACCGGATCGC CGCTGGATGC CGTGTTGTTC
CATGCCAAAG GATCGCCCAA GCTGATTAAC GGCGTGGTGC GGATGAACAT GAGCCCGCAG
CTGCGCGATA TCCAAACCGG CTTCAAGTCC GTTCTGGCCT ATCCGCAGTT TAAAAACCTG
CCGCTGATCG TCGGCGAATC GGACCCGGAG GGCTGTGCGG CTTGCGGAAT GGCCACGAAT
CCTTCCAATG CCTACCGCAA TGGAACCATG TATTCGAGCT ACACCGCAGC CACATTTGCC
CGCAAATATG CCCTGGCCGA TCAGTATGGT GTCAATTTCC TCGGTGCGGT GTCGTGGTCT
TTTGAATTCG AAAACCAGCC GTGGTTTTAC GGCTTCCGCG ACCTCGCCAC CAACGGCGTC
GACAAGCCGG TATTGAACGT CTTCCGGATG TTTGGCAAAA TGAGCGGCGA CCGCGTGGAG
GCCCGCAGCG AGCGGATGTA TCCGCTGCAA ATGGTGCTCG ACTCCAGCAT TCATGGCGAA
AAGACGGAAA TCGGCGTGCT TGCATCCAAA GCGGGGCGGA ACGCCGCGGT GATGCTTTGG
AACTACCACG ACGATGACCG CCAGGGCGCG GCCGAACCCG TCGAAGTCCA ACTGAGCGGA
ATCCCGGCAG GCTCGGTAAC CTTCACCGAA TACCGCATAG ATCACGAACA CAGCAATTCC
TACGAGGTTT GGAAGAAAAT GGGCTCGCCC CAGCAACCCA CCGCCGCGCA AATTACGACG
CTCGAAAAAG CCGGCCAGCT CGAAACAATG GGCAAACCCC GTAAGCTGAA AGTTGCCAAC
GGCTCAGTAC GAATCCCCGT GGCATTGCCA AGGCAGGCCG TATCGCTAAT CAAGCTCGAT
TGGTAG
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| Protein sequence | MRRSLRVTIQ LLLIFITVLP AFAQQPVRVE VDFAKKVGPM NPAWAWFGYD EPNYTYMKDG
KKLLSEIAAL SPVPVYVRAH CLLCTGDGTP ALKWGSTNAY TEDSQGKPVY NWAIVDSIFD
TYVQRGMKPL AQIGFMPEAL STNPTPYQHD WKPGDPYFKI ITGWAYPPKD YQKWTDLVYN
WVKHSVERYG QKEVESWYWE VWNEPNGYWK GTMEEFFKLY DYSADAVKRA LPTARIGGLN
IAGTSGKTGT QWLEAFLKHC AEGTNYATGK TGSPLDAVLF HAKGSPKLIN GVVRMNMSPQ
LRDIQTGFKS VLAYPQFKNL PLIVGESDPE GCAACGMATN PSNAYRNGTM YSSYTAATFA
RKYALADQYG VNFLGAVSWS FEFENQPWFY GFRDLATNGV DKPVLNVFRM FGKMSGDRVE
ARSERMYPLQ MVLDSSIHGE KTEIGVLASK AGRNAAVMLW NYHDDDRQGA AEPVEVQLSG
IPAGSVTFTE YRIDHEHSNS YEVWKKMGSP QQPTAAQITT LEKAGQLETM GKPRKLKVAN
GSVRIPVALP RQAVSLIKLD W
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