Gene Dfer_5252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5252 
Symbol 
ID8228863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6334145 
End bp6334990 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID644933098 
ProductSMP-30/Gluconolaconase/LRE domain protein 
Protein accessionYP_003089611 
Protein GI255038990 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA TCGCAACCGT ATTGGAACAC CGATGCCTGC TGGGCGAAGG CCCGGTGTGG 
GACGCGGATC GGCAGCGTAT ATTGTGGGTT GATATATTGC GGGGCGAGAT CCACCAATAT
TTTACGCTCA CTGAAAAACA CCACATTTTT AAAGCCGGAC AAATGGTCGG GGCCATTGCC
TTGACCAAAA CCGGTAGCCT GATAGGCGCG CTGCACCACG GCTTTTACCA TATCGACCTC
GAAAACGAGC TTCTCGAACA AATCACCGAC CCCGAAGCCA ATCTACCAGA AAACCGTTTC
AACGACGGCA AATGCGATCC CGCCGGACGG TTCTGGGCCG GCACAATGTC GGTAACCGGC
AAAGCCAATG CCGGGAAGCT ATATATGCTG GACAACGACC ATTCGGTACA AACGAAAATC
GACGGCGTCA GCTGCTCCAA CGGCCTGGCA TGGAGCCACG ACCAGAGGAC ATTCTACTAC
ATCGACACCG GCACACAAGA AGTTGTCGCC TACGATTTCC ACCCCGCCGA CGCAACAATC
TCCAACAAAC GGACCATCAT CCGCATCGCA CCGGAAGAAG GCTACCCCGA CGGGATGACG
ATCGACAGCG AAGGAATGCT CTGGGTAGCA ATCTGGGGCG GCGGAAAAGT GAAGCGATTC
AACCCCGCCA CAGGCCTCTG CCTCGACGAA ATACATTTAC CAGTCACACT CGTCACTTCC
TGCACATTCG GCGGCCCCAC CCTGCGCGAC CTCTACATCA CCACCGCCCG CACGGGACTT
ACGGATGTTG AGCTGCTGGC GCAGCCGCTG GCGGGGTCGC TTTTTGTGGT GCGGGGGCGT
GGATAA
 
Protein sequence
MSTIATVLEH RCLLGEGPVW DADRQRILWV DILRGEIHQY FTLTEKHHIF KAGQMVGAIA 
LTKTGSLIGA LHHGFYHIDL ENELLEQITD PEANLPENRF NDGKCDPAGR FWAGTMSVTG
KANAGKLYML DNDHSVQTKI DGVSCSNGLA WSHDQRTFYY IDTGTQEVVA YDFHPADATI
SNKRTIIRIA PEEGYPDGMT IDSEGMLWVA IWGGGKVKRF NPATGLCLDE IHLPVTLVTS
CTFGGPTLRD LYITTARTGL TDVELLAQPL AGSLFVVRGR G