| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5250 |
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| Symbol | |
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| ID | 8228861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6330605 |
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| End bp | 6333013 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644933096 |
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| Product | ABC transporter related |
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| Protein accession | YP_003089609 |
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| Protein GI | 255038988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTTC CTATTTACAA GCAGCTGGAT CAAATGGACT GCGGCCCCAC TTGTCTTCGC
ATGATTGCGA AGCATTTCGG GAAGCATTAT ACAGCACAAA CCCTTCGGGA AAAATCGCAA
ATCAGCCGCG ACGGAGTATC CATGTTGGGC ATTGCGGAAG CAGCGGAAAC AATTGGTTTC
ACGTCGATTG GTGTGAAGGT AACGGTAGAA AAACTGATAG ATGAGGTTCC ACTTCCCTGC
GTATTACATT GGGGGCAAAA TCATTTTGTG GTTTTGTATG AGGTGAGTGG TCGCTCATCC
GTGATTGACA GACACCTATT AGGAAAGGCC TGGGGAGGGA GGGCATCAGG TAATTCCCTG
GATAGTAGAA TAATTACGCC TTCTGTTCAT GAGAAAAATG TACACGACAG AGAAAATGGG
TATGGCAATA AGAAAGCGAT TTTTCACATC GCCGATCCTG CCAGCGGCCT GGTTTCGTAT
ACAGCTGCTG AATTCAATAA ACAGTGGCTT TCGGGTGGTG TTGAAGATAG CAGGGAGGGT
TTAGCGCTGC TGCTGGAACC TACCACGCGC TTTTACGAGG AAGAGGGGGA GAAAGTGAAA
GGATTGCATT TTTTTCAACT GCTGGGTTAT CTCTGGCGGT ATAAAAAACT GGTTGTTCAG
TTAGGGCTCG GCATGTTGGT AGGCAGTGGA CTGTCATTGC TTATGCCTTT CTTCACGCAA
TCAGTGGTCG ATATAGGAAT TAATAACCAG AACTTATCTT TTATATATCT GATTTTAATT
GCTCAAATTG TTCTTTTACT GAGCACAGGA GCAGTTGATT TTCTTCGCAG CTGGATATTG
CTTCATATAA GCACAAGGCT CAACCTGACG GTTTTGTCGG AGTTTCTTTC CAAACTAATG
CGCCTTCCTC TTTCCTTTTT TGATGTCAAG CAATTCGGTG ACATTATGCA GCGGATGGGC
GACCATAGTC GCATTGAGGC TTTTCTCACG GGGCAAACGC TGAGTCTTTT GTTCTCGATT
TTCAATTTAA TTGTTTTTGG TTTTGTACTT GCTTACTACC ATATATCGAT ATTTTTTGTA
GCTGCTGGTG CGTCCATTTT GTACGCGGTT TGGGTGTTGT TATTCCTGAA CCGGCGCCGG
GTTTTGGATA CGAAACGTTT TGATGTTTCG TCTTCCAACC AAAGCAAAAT TGTTCAGCTT
ATCCAGGGTA TGCAGGATAT TAAGCTGGCA GGAGCCGAAA CCGCCAAGCG CTGGGAATGG
GAGCGGGTAC AAGCGCAGCT TTTTAAATGG TCGATAAAGA GTTTATCGCT ATCGCAGTAT
CAACAGGCAG GGGCACTTTT GATCAATCAG GGGAAAAACA TTTTTATCAC CTTTTTGGCA
GCAAAGGCTG TGATTGACGG GCAGTTAACC TTGGGCGGAA TGGTGTCTGT CCAATATATT
CTAGGGCAGT TCAATGCACC CATTGAGCAA ATGATCAGCT TTCTGCGCTC GTGGCAGGAT
GCGCAAATGA GTTTGGAAAG GTTGAATGAG GTCCATGAAC TCGCCGACGA AGAGCCCGCC
GGGGAACCGA AAAGAAGGAC CTGGGACCAA GAACAAGATA TTAACTTAAA TAACATCACT
TACACTTACC CGGGTGCAGG AAATGAGCCT GTTTTGAGGA ACATCAATTT CACTATTCCA
TATGGTAAAA CGACCGCTGT TGTAGGGACA AGTGGAAGTG GCAAAACGAC GCTATTGAAA
TTATTGTTAC GATTTTACGA GCCTCAAAGT GGATCTATTT CATTAAGTAA ATGCGCAATA
CAAGAGTCAG ATTCAACAGG AAAAAAAGTT GGAGATGCAA GTCATCAAAA CATAATTGGA
AATGCGCTTG ATTTGAAATA CATTTCTCAT AAGGCCTGGC GGCTTCAATG CGGCGTTGTA
ATGCAGGAGG GATTTATTTT TTCCGATTCC ATTGCCAGAA ATATTGCCGT GGGCGACGAG
GTAATTGATC AGGAGCGGTT ATATCAGGCT GCGCATATTG CTAATATTCA TGAATTTATA
GAGTCACTCC CCCTGGGCTA TCATACCAGA ATAGGAGCGG AAGGAAACGG GATAAGTCAG
GGGCAAAAAC AACGCATATT AATCGCCCGC TCCGTTTATA AAAATCCTCA ATTGTTGCTT
TTCGACGAAG CGACCAATGC ACTTGATGCC AATAATGAAG CCATCATTAT GCGAAACCTG
GACGAATTTT TTAAGGGCCG TACCGTGATA GTCGTAGCCC ATCGCCTGAG TACAGTCAGG
CATGCCGACC AGATCGTGGT TATGGACAAA GGAGAAATTG TAGAAATAGG AACGCATGAT
GAGTTGGTAC TTGCTCATGG AAAATATTTT GAGCTGGTTA GTAATCAATT GGAATTAGCA
GCTGGATAA
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| Protein sequence | MAFPIYKQLD QMDCGPTCLR MIAKHFGKHY TAQTLREKSQ ISRDGVSMLG IAEAAETIGF
TSIGVKVTVE KLIDEVPLPC VLHWGQNHFV VLYEVSGRSS VIDRHLLGKA WGGRASGNSL
DSRIITPSVH EKNVHDRENG YGNKKAIFHI ADPASGLVSY TAAEFNKQWL SGGVEDSREG
LALLLEPTTR FYEEEGEKVK GLHFFQLLGY LWRYKKLVVQ LGLGMLVGSG LSLLMPFFTQ
SVVDIGINNQ NLSFIYLILI AQIVLLLSTG AVDFLRSWIL LHISTRLNLT VLSEFLSKLM
RLPLSFFDVK QFGDIMQRMG DHSRIEAFLT GQTLSLLFSI FNLIVFGFVL AYYHISIFFV
AAGASILYAV WVLLFLNRRR VLDTKRFDVS SSNQSKIVQL IQGMQDIKLA GAETAKRWEW
ERVQAQLFKW SIKSLSLSQY QQAGALLINQ GKNIFITFLA AKAVIDGQLT LGGMVSVQYI
LGQFNAPIEQ MISFLRSWQD AQMSLERLNE VHELADEEPA GEPKRRTWDQ EQDINLNNIT
YTYPGAGNEP VLRNINFTIP YGKTTAVVGT SGSGKTTLLK LLLRFYEPQS GSISLSKCAI
QESDSTGKKV GDASHQNIIG NALDLKYISH KAWRLQCGVV MQEGFIFSDS IARNIAVGDE
VIDQERLYQA AHIANIHEFI ESLPLGYHTR IGAEGNGISQ GQKQRILIAR SVYKNPQLLL
FDEATNALDA NNEAIIMRNL DEFFKGRTVI VVAHRLSTVR HADQIVVMDK GEIVEIGTHD
ELVLAHGKYF ELVSNQLELA AG
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