| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5247 |
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| Symbol | |
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| ID | 8228858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6326483 |
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| End bp | 6328111 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644933093 |
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| Product | peptidase C39 bacteriocin processing |
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| Protein accession | YP_003089606 |
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| Protein GI | 255038985 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1651] Protein-disulfide isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACT TCTTTAAAGT TTCCGGAGAT AATGCCACCG ATACATTGTA TAGCCTGCTG
CGAAATCTGA ATGCAAAAGT GACCTGGGAA ACCGTTCGGG AAACGATGTT GCAGCATCCC
GATTCTCCGA GTTTACTGAG TTTGAGTGAA GTTCTGTCGG GTTGGAACAT TGATAACGCC
GCGCTTCAAC TGAATACAGT GGAACAGCTC CGCGAGATTC CTGTGCCATT TATTACGCAA
ATCAAAAAGA AAGGTGGATG GTATATTCTG ATCAATCAAA TTCGCGAAAA ACATATCCAA
TACACCGACA GTGAGCAGGG AGAGGTAACT TTATCGCTGA GCGATTTTGA AAAAAGGTGG
ACTGGGATAG TGTTATTGAC AGAAATCAAT GAGCAATCCG GTGAAGTTGA TTATGATTCA
AAACGATTAA AGGAGCAATT GAGGAAGTGG CGGAGCCCGT TTGTATCAGG AGCGACGTTA
CTCGTTTTAT TTAGCGCTCT AATGTTTGCC GGACGAAGCT TTTCAACTCC CGAATGGCTA
TTGTTTTTTA CAAAAATTTC CGGCTTGTTT TTTACGGGTT TGTTGATTGC CAAACAATTA
GGTAGTAAAA ATGACTTGAC GGACCGGCTA TGCAGGATTA ATGACAAAAC CAGTTGCGAA
AACGTTCTGA ATTCACCCGG CGCTAAGCTG TTCGGCTGGC TAAACTGGTC GGACTTAGGC
TTACTCTACT TTGCAGGCGG TTCTTCTGCT TTGCTCTTCA CAGGTGAACA GCACAATGAA
TTCAATCTTT TAAATGCCCT TGCTTTGCTA GCGATGCCTT ACGTCGCTTT TTCGATTTAT
TATCAAGCCT ATAAAGTGCG TCAGTGGTGC ACATTATGCC TTGGGGTACA GGTAATTCTT
ATTGTCGAAG GAGTAATAGC ACTGACTCAA TTGAAGGCCT TACCCGGACA TATCCAGCCA
TATTTAGTGC TGCTGATTGG CTTTTTGCTT CCAACTATTG CATGGGTAAT TATAAAGCCG
TTATTAGATA GCCGAACCCA AATCCGTCGT GAGCATGAAG AATTATTGGC TTTAAAGCGA
GATCCGGCAA TATTCAAAAC CTTGTTAATT CAACAGCCTC AATCACCGCC AATTTCTGCT
GATATTTACC CGCTTGTGCT CGGAAATCCT GATGCTGAAA TCAAAATTAC AATGGTGACG
AACCCTTATT GCAGTTCGTG TTCCAGGGCA CATAAGGAAT TGGAACAGTT GGTTTTGCAA
GATGAGAATG TGAGCGTGAC GACCATTTTT TCTACAACCG GCGATTCCAG TCCCGCGACG
AAGGTAGTTA CACATTTATT GGCATTGGCC AGGCACGAAA CGTCGGCTCG CAGTGCTTTA
ACTGAATGGT ATAGTCAAAA AGAAAAGGAC TACAATGCAT GGGCTAAGTC CCATCCAACG
ACCACAGATC CCACGGAGAT GATGGCAATA TGCCGAAACC AAAGGCTATG GTGCCATGAA
GCGGATATCG CCCTAACTCC CACTATTTAT ATCAACGGCT ACAAAATGCC CGAAATATAT
AAACTAGAAA GCTTGCAATG GATTTTAAAG AGAGTGGAGT TTGATAAAGT GTTAGAATCA
AACGTATGA
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| Protein sequence | MLNFFKVSGD NATDTLYSLL RNLNAKVTWE TVRETMLQHP DSPSLLSLSE VLSGWNIDNA
ALQLNTVEQL REIPVPFITQ IKKKGGWYIL INQIREKHIQ YTDSEQGEVT LSLSDFEKRW
TGIVLLTEIN EQSGEVDYDS KRLKEQLRKW RSPFVSGATL LVLFSALMFA GRSFSTPEWL
LFFTKISGLF FTGLLIAKQL GSKNDLTDRL CRINDKTSCE NVLNSPGAKL FGWLNWSDLG
LLYFAGGSSA LLFTGEQHNE FNLLNALALL AMPYVAFSIY YQAYKVRQWC TLCLGVQVIL
IVEGVIALTQ LKALPGHIQP YLVLLIGFLL PTIAWVIIKP LLDSRTQIRR EHEELLALKR
DPAIFKTLLI QQPQSPPISA DIYPLVLGNP DAEIKITMVT NPYCSSCSRA HKELEQLVLQ
DENVSVTTIF STTGDSSPAT KVVTHLLALA RHETSARSAL TEWYSQKEKD YNAWAKSHPT
TTDPTEMMAI CRNQRLWCHE ADIALTPTIY INGYKMPEIY KLESLQWILK RVEFDKVLES
NV
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