| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5212 |
|---|
| Symbol | |
|---|
| ID | 8228822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6281164 |
|---|
| End bp | 6282372 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644933061 |
|---|
| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase |
|---|
| Protein accession | YP_003089575 |
|---|
| Protein GI | 255038954 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCTGA AAGGTAAAAA GATATTACTG GGCGTTTCGG GAAGCATTGC CGCTTACAAA
TCCGCATTGC TCGTCCGGCT GCTGGTGAAG GCAGAAGCCG AAGTCCGGGT GGTGATGAGC
CAGTCGGCGA AGGAATTCAT TACGCCGCTC ACGTTGTCGA CGCTGTCCAA AAACCCGGTC
CTGCTGTCGT TTACCAAAAG CGAAACCGGC GAATGGAACA ACCACGTCGA ACTCGGGCTT
TGGGCGGATC TGATGATAAT CGCACCGGCG ACGGCAAAAA CGCTTTCGAA ATGCGCTACC
GGCCATTGCG ACGATCTGCT GACGGCCATT TACTTTTCCG CGCGTTGTCC GGTCTATTTC
GCGCCGGCCA TGGACGTGGA TATGTTCCGC CACCCGTCCA CACAGCAGAA TATGCGGCAG
CTCGTCGCTT ACGGCAATTT CTTCGTCTAT CCCGAGCATG GTGAACTGGC GAGCGGGCTC
ATCGGCGACG GACGACTGGC CGAGCCCGAG AACATTATTA AAGTGCTCGA TTCACATTTC
GCAAAACAAC CCTCGGCTGT TTCTAAACGT GTGCTGATCA CCGCCGGCCC TACCGTGGAA
CCCATCGACC CGGTCCGTTT CATCAGCAAC CGATCATCGG GTAAAATGGG CTATGCGATG
GCCGAGGCAT TTGCCGCGGC GGGTGCGCAG GTAACGCTCG TGAGCGGGCC TACCCATTTG
AAAGCATTTA ATGCAAATAT CTCGACGGTG CATGTGGAGA CAGCGCACCA AATGTTCGAG
GCGGCAGAAG ACCATTTCGG CGAAAGTGAC CTGGTGATCT TTGCCGCTGC CGTAGCCGAT
TATGCGCCGC GCGTCGTTGC CGAACAAAAA ATTAAAAAAC AAGGCGATAG CATGTCGCTC
GACCTCGCCA AAACAACCGA TATTGCAGGA ACGCTCGGTC CGGGGAAACG AAACGGGCAA
CTGATCATCG GATTTGCGCT GGAAACGGAA AACGAACTAG CACATGCCCA CGACAAGCTG
GTCCGGAAAA ACTTCGATTA CATTGTTTTA AACTCCCTCA ACGATCCGGG CGCAGGCTTT
GCACACGATA CCAACAAAAT AACCGTTATT GACAAAAATA ATAATGTGCA GCAATTTGAT
CTTAAATCCA AAGATGAAGT TGCCCGGGAC ATTCTCAATC TTGTACTAGC TCAATGGAAC
GAAGCATAA
|
|---|
| Protein sequence | MNLKGKKILL GVSGSIAAYK SALLVRLLVK AEAEVRVVMS QSAKEFITPL TLSTLSKNPV
LLSFTKSETG EWNNHVELGL WADLMIIAPA TAKTLSKCAT GHCDDLLTAI YFSARCPVYF
APAMDVDMFR HPSTQQNMRQ LVAYGNFFVY PEHGELASGL IGDGRLAEPE NIIKVLDSHF
AKQPSAVSKR VLITAGPTVE PIDPVRFISN RSSGKMGYAM AEAFAAAGAQ VTLVSGPTHL
KAFNANISTV HVETAHQMFE AAEDHFGESD LVIFAAAVAD YAPRVVAEQK IKKQGDSMSL
DLAKTTDIAG TLGPGKRNGQ LIIGFALETE NELAHAHDKL VRKNFDYIVL NSLNDPGAGF
AHDTNKITVI DKNNNVQQFD LKSKDEVARD ILNLVLAQWN EA
|
|---|
| |