| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5196 |
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| Symbol | |
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| ID | 8228806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6264654 |
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| End bp | 6267143 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933045 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003089559 |
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| Protein GI | 255038938 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.283017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.121855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TGAACACCTC ATTCCTGTCA GCCGTCAGAT TAGTCTTTTT GACATTATTT
CTGGGTATTG CAGCCCATCA CACCTTCGCC CAGGCACCGG CACCGGGAAA TTCTAAGATT
TCCGGAATTG TACTCGACTC AGCGGCCGCT AAGGGCGTGG AGTTTGCGAG TATTGCATTA
TTCAGTGTCG CTGACAGCAA GGTCATTGAC GGCACAACGG CCGATGAAAA CGGCAAATTC
GCGCTTGCGA AAGTAGCGCC TGGTGCCTAC CGTCTGATGA TCTCGTTCAT CGGGTATAAG
GACAAGGCCG TGGATGTGAA GGTGGAAAAG GGCAAAGATG TGGAACTCGG GTCGGTTCAG
CTAGCGTCGA GCGTGCAGAA TTTGCAGGAG GTGACGATCA CAGGCGAAAA ATCGCTGATC
GAGGAGAAGG TGGACCGGAT GGTTTTTAAT GCAGAAAAAG ACATTACTTC GAAAGGCGGC
GATGCGTCCG ATCTGCTGCG GAAAGTACCG ATGCTTTCAG TGGACCTGGA CGGCAACGTG
TCGCTGCGGG GGAGCTCCAA TATCCGTGTT TTGATCAACA ACAAGCCTTC GACGATCATC
GCGAGCAACG TTGCGGATGC CTTGAAGCAG ATCCCGGCCG ATATGATCAA GTCCGTGGAA
GTGATCACGT CGCCTTCCGC CAAATACGAC GCCGAGGGCT CGGGTGGGAT CATCAATATC
ATTACCAAAA AGAACAACCT GCAAGGCCTG ACGCTGAATA TCGATTCGGG GGTAGGTAAC
CGCGGCTCGA ACCTCGGCTT GAACGGCAGC TACCGCAAAG GCAAAATGGG TTTCACGCTG
GGCGGTTTCG GGCGCGCATT CTACAATAAA GCGACATCCG TGCTCGACCA GACGACTTAT
TCGGGCGGCA GCTCGTTCCT GACCAACCAG AGTTCTACGG CCAAAGATCG TGGGATGTTC
GGGCAATACT CGCTGGGTTG GGATTATGAT TTGGGTAAAA ACCAGGCATT ATCGGCCGGC
TTGCGCTACG GAACACGGAA TTTTATCCAA AAACAGGACC TGACGATCAA TCAATACGAA
AATAGCGCGC TAAGCAACAA TTCTTTACGC AAAGTCGACC GGAAGGATTT GTCGGGAACC
GTGGATTTCA ATATCGATTA TATCCGGACT TTCAAGCCGC AACAGGAGTG GAGCATTTCG
ACCTTGTACA GCCGCACGGG CCTCACCAAT AATTTTAATA CCGATTTGCT CAACGAATCG
GGCGCGGTGG ATAGCAAGCT GAAAAACGAG AACAAAAATG AAAATTCGGA GTTGACGCTC
CAAACGGATT ATCAGACACC ACTGGGTAAA AATCAGATGC TCGAATTTGG TGCAAAAGGA
ATTTTCCGGA CCGTGGACAG TGATTTCAAA TACCTCACCG CAGGCGAATC GGGCGATTTC
GTTTTGAGCC CAACCAACCC GTCGGGCGTT TTGAACTACA AGCAGAATGT GGCTGCGGGA
TATCTTTCCT ACACACTTTC GACTCAGAAC AAATACACAT TCAAACTGGG AACGCGCTAC
GAATATACGG GCATCACGGC CGATATGGGC GCGGGCAAGG CGATTGACAT TCCGGCTTAC
GGAAACCTGG TGCCGAGCAT CAATGTGTCG AAGGTGCTGT CGGGCAGCAC TACGCTGAAA
GCCGCTTACA ACCGCCGTAT CCAGCGCCCG GGCATCCAGC AGCTGAACCC CAATGTGAAC
CTGGCCAACC CGCAGAGCAT CAGCACCGGT AACCCGGCAT TGAGCCCCGA ACTGACCGAC
AACTTCGAGC TCGGATTGAG CACGAATATC AAGAAAACGT ACATTAATGC CTCTGTTTTT
GCACGCCAGA CCAATAATTC GATCACGCAG GTGAGAATGG CCGTGGATAC GCTCCAAGGC
GCTATCGTCA CCACTTTCGA AAACATCGGC AAGCAGCGCG CATACGGCGC CAACATCTTC
GCCAACGTGT ACCTGACCCC GAAATGGACA TTGAACGGAA GCATCGACAT TCTGCATTCG
TACCTCGAAG GACAAACGAC CGGTCTGGAC GGTACTTCGG TGGGCATCAG TAATTCGGGT
TTCAATTATG GCGGCCGGTT AATGTCACAG CTTTCGCTGC GGAACGGCTG GGGATTGCAG
GCATTCGGCT TTTACCGGGG CAAGGAAATC CAGTTACAGG GAACGCGCAC CGGTTTTTAC
CTATATTCAC TAGGGTTCAA AAAGGATTTT GCCAACAAGA AAGGCAGCAT TGGTTTCGGA
GCGGAGAATT TCCTGACAAA AGGCGTGCGT TTTACGTCCG ACCTGACATC GCCGCAATTC
GTCCAAACCG GCTCCACGCA GCTTTATAAC CGCAATTTCA AGGTGACATT CAGCTACTCG
ATCGGGAAGA TGAGTTTTAA TGCGCCGAAG AAGAAGACGA AGTCAGTAAA CAATACGGAT
GTTGTAGGAG GCGGAGGCCA GCAGAACTGA
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| Protein sequence | METMNTSFLS AVRLVFLTLF LGIAAHHTFA QAPAPGNSKI SGIVLDSAAA KGVEFASIAL
FSVADSKVID GTTADENGKF ALAKVAPGAY RLMISFIGYK DKAVDVKVEK GKDVELGSVQ
LASSVQNLQE VTITGEKSLI EEKVDRMVFN AEKDITSKGG DASDLLRKVP MLSVDLDGNV
SLRGSSNIRV LINNKPSTII ASNVADALKQ IPADMIKSVE VITSPSAKYD AEGSGGIINI
ITKKNNLQGL TLNIDSGVGN RGSNLGLNGS YRKGKMGFTL GGFGRAFYNK ATSVLDQTTY
SGGSSFLTNQ SSTAKDRGMF GQYSLGWDYD LGKNQALSAG LRYGTRNFIQ KQDLTINQYE
NSALSNNSLR KVDRKDLSGT VDFNIDYIRT FKPQQEWSIS TLYSRTGLTN NFNTDLLNES
GAVDSKLKNE NKNENSELTL QTDYQTPLGK NQMLEFGAKG IFRTVDSDFK YLTAGESGDF
VLSPTNPSGV LNYKQNVAAG YLSYTLSTQN KYTFKLGTRY EYTGITADMG AGKAIDIPAY
GNLVPSINVS KVLSGSTTLK AAYNRRIQRP GIQQLNPNVN LANPQSISTG NPALSPELTD
NFELGLSTNI KKTYINASVF ARQTNNSITQ VRMAVDTLQG AIVTTFENIG KQRAYGANIF
ANVYLTPKWT LNGSIDILHS YLEGQTTGLD GTSVGISNSG FNYGGRLMSQ LSLRNGWGLQ
AFGFYRGKEI QLQGTRTGFY LYSLGFKKDF ANKKGSIGFG AENFLTKGVR FTSDLTSPQF
VQTGSTQLYN RNFKVTFSYS IGKMSFNAPK KKTKSVNNTD VVGGGGQQN
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