| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5180 |
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| Symbol | |
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| ID | 8228790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6247949 |
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| End bp | 6250051 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644933030 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003089544 |
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| Protein GI | 255038923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.256851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACC TTTCCATCCG GGTCGCCATT TGGGCGGTCC TCGTTTCGTG CAATGCGTTT
GCGCAAGATT CGCTTATCAT TAAAAACCGC TTCCTGGAAA GAAAATTCAC GATCAGTGAT
AATTCTTTCC ACACATCCCG CTTCCAGCAT CTTCTGACGA ACAAAGATTA CAGCCGCCCT
GGCTCGGAAG AGTTTTATTT TACAATTAAC GGCAAGCCTG CGAGTGCCAA CGGCGCGAAT
GGGTTATTCA GGCACGTAAA GCATTCACTC GTCCGGGCGG GCAACGGCAT CCAGAAAGCG
ACTGTCCAGC TGGCCGGCAA GCCTGGTACG GAAGCCGAAA ATGTAATAGT GGATTTAACC
TATGAAGTCT ACGACGAACT GCCGGTAGTC CGGAAGCAGG TCGGCATTAC CAACAAGGGC
GCCAAAGCCA TTGCCATTGC CGACCTGGAA GTGGAGCGGC TAAACCTGGT GCCCGTTTCT
TCCCAGCAAA GCGAGATGTA TACCAACTAC GGTTCCCGTT TCGCCTGGCG GCCCTACCAC
GGCGACCACC ACGATGCAGC CGTTTTTGTG TATAATAATT ACGCGAAAGA AGGCTTTATC
CTTGGTAATG AAGCACCCAG CATTCTCAAA AAGACCGAGG TATACACCGA TCACCACCGC
ATTTCGACCG GTATGACGAG CCTGACGGAC CATTATCCGT TTAAAAAATG GATTGAACCG
CAGGAAACAT TTAACAGCCC ACGGACATTC ATCTGTCTCG TGCAGTCCCA AAAGTGGGAA
GATGCATTCG AAGGCCACTT CGCCGACTTC GTACGTACAC GCATGGGCGT GAAATTGTTT
GAGCGGAAGG AAATTCCGTT CACATTCTAC AATACGTGGC GGCCTTTTTA TACGAACATC
AACGACACGC TCGTAACGCA ACTAGCCGAC GGCCTCGAAG GCACCGGCAC CGACCTGTTT
ATCATGGACG CCGGTTGGGA AAACAATTAC GGCGACTGGG AACCACATCC GAAGCGATTC
CCGAACGGAC TGAAACCGAT CACCGATCAT ATTCGCAAGC GGGGCATGAA AGCCGGCCTT
TGGATGGGCC TCGCCTCAGT GGATAAAAGC AGTAAACTAT ACAAAGAACA TCCCGAATGG
GCCATTTACG ATAAAAACGG TGAACCGGCT TACCTGCACG AGGAAATGAA GAACCGCGTG
ACGATGTCGC TCGCATCCGG CTACTACGAT TACATTCTAG CCAAAATAAA GCGCCATGTA
CGGGAGAACG ATCTTGCTTA CATCAAGCTC GACCTGGCCA TCGCCAACTC TGCATATGTC
CTTGATTACT CCAAAAAAGG AGATTACAAA TCAGAAGGAA AGAACCATAA AGACCGCGAA
AGCTCCTACT ATGCCATTTA TGAAAGAGCA TTGCAGCTTT TTGACGACCT GCACAAGGAG
TTTCCCGACC TGCTCGTGGA CTGTACCTAC GAAGTTTGGG GAGAATATTA TATTAATGAC
TACGCGCTCA TCGAACACGC CGACTACGAC TGGCTCACCA ACTACGACGA CGACGCACCC
GTAGGCCCGA TCAACATCCG CCAGATGGCC TTCGACCGCA GCCGCGCCAT TCCCACCGCC
ACCAACCTGA TCGGCAACCA GTTCATGGAT TCACCCTATT CCAAATTCAC ATTTCTCTCG
CTTGCCTCCG TGAAGCCCAT CCTCGTAGGC GACACGCGCA AACTCCCCGC CGAGCTGAAA
CCGTGGTACC TGAAATGGAA CACCTGGTTC AAAATGATGG ACAAGAAATA CCAGTTCACC
CGATTCTCGT ACGTGTCGGA CATCTTCCAG CGCCCGACCA TGAGCAACTG GGACGGCGTT
TACAAATTCA ACAAGGAAAA ACAGGGCGGC GTGCTGTTCT TCTTCCGGAA TGGATCCGTA
GAAACAATGC GCACATTCGC ATTCCCGCTT GGCGAGCCGG GCAGTCGGTA CCGGCTTTTT
TCGCCGGAAG ATGGCAAGGA TTTGGGGGTT TTTACGGGGA AGGAACTGAA CGAAAAAGGA
ATCCCGGTGG AGATTTCACA ACAGTTTGAC GCGAGAGTTT ACGGAATTGA AAAGATCAAA
TAG
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| Protein sequence | MYNLSIRVAI WAVLVSCNAF AQDSLIIKNR FLERKFTISD NSFHTSRFQH LLTNKDYSRP
GSEEFYFTIN GKPASANGAN GLFRHVKHSL VRAGNGIQKA TVQLAGKPGT EAENVIVDLT
YEVYDELPVV RKQVGITNKG AKAIAIADLE VERLNLVPVS SQQSEMYTNY GSRFAWRPYH
GDHHDAAVFV YNNYAKEGFI LGNEAPSILK KTEVYTDHHR ISTGMTSLTD HYPFKKWIEP
QETFNSPRTF ICLVQSQKWE DAFEGHFADF VRTRMGVKLF ERKEIPFTFY NTWRPFYTNI
NDTLVTQLAD GLEGTGTDLF IMDAGWENNY GDWEPHPKRF PNGLKPITDH IRKRGMKAGL
WMGLASVDKS SKLYKEHPEW AIYDKNGEPA YLHEEMKNRV TMSLASGYYD YILAKIKRHV
RENDLAYIKL DLAIANSAYV LDYSKKGDYK SEGKNHKDRE SSYYAIYERA LQLFDDLHKE
FPDLLVDCTY EVWGEYYIND YALIEHADYD WLTNYDDDAP VGPINIRQMA FDRSRAIPTA
TNLIGNQFMD SPYSKFTFLS LASVKPILVG DTRKLPAELK PWYLKWNTWF KMMDKKYQFT
RFSYVSDIFQ RPTMSNWDGV YKFNKEKQGG VLFFFRNGSV ETMRTFAFPL GEPGSRYRLF
SPEDGKDLGV FTGKELNEKG IPVEISQQFD ARVYGIEKIK
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