Gene Dfer_5165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5165 
Symbol 
ID8228775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6231521 
End bp6231955 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID644933015 
Productresponse regulator receiver protein 
Protein accessionYP_003089529 
Protein GI255038908 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AAGGCATTAT TATAGTGATT GAGGATGATT TAGACGATCA ATTCGTGCTC 
GAAGAGGCTT TCGTAGAGCT TGATTTCCCC AACAAAAGGA TTTATTTCCC CGACGGATTT
GCAGCACTAG ACTATTTGCA TGCGCACCAT GGCTCCATTT TCTTGATACT ATCGGATGTA
AATCTGCCAA AGCTCACAGG ATTAGAGCTG AGAGTTGAAT TAAAGAAGAA TGCGGACATA
GCACTTAAAT GTGTGCCTTA CCTGTATTTG ACGACATCGC TTAACCATGC TCATGTGGTC
GAAGCCTACT GCGATTCGGT GCAGGGTTTT TTCGTGAAAC CGGCCGACTT TGAGGAGATA
AAAGAGCTGT TGGAAACTAT TGTTCGCTAT TGGACTGCTT CTGCATCAAG CCGACTACAT
GAAGAATGTT TTTAG
 
Protein sequence
MNKKGIIIVI EDDLDDQFVL EEAFVELDFP NKRIYFPDGF AALDYLHAHH GSIFLILSDV 
NLPKLTGLEL RVELKKNADI ALKCVPYLYL TTSLNHAHVV EAYCDSVQGF FVKPADFEEI
KELLETIVRY WTASASSRLH EECF