Gene Dfer_5160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5160 
Symbol 
ID8228770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6226400 
End bp6227410 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content52% 
IMG OID644933010 
Productglycosyl transferase group 1 
Protein accessionYP_003089524 
Protein GI255038903 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.738338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTGG CTATACTATC ATCGATCGCA TGGCGTACGC CGCCCCGGCA ATATGGGCCG 
TGGGAGCAGG TGGCCTCCTA TCTGACGGAG GGGCTCGTCG AGAAGGGGGT AGATGTAACG
CTTTTTGCCA CAACCGATTC GATGACTACG GCAAAACTGG AAGGAACCTC GCACGCTCCC
TATGCGGAAG ACAGGGAGGT AGACCCGAAG GTAGCTGAAT GTTTGCATAT CAGCCATCTA
ATGGAAAACG CCTCGCGGTT TGACCTGATC CACAATCATT TCGATTTTCT GCCACTAACC
TACTCAAAGC TTATCCCCAC CCCAATGCTG ACGACGATCC ATGGGTTTTC ATCCCCGAAA
ATCCGGGATG TCTACCGGAA GTATAACGGA TCATGTTTTT ACGCATCCAT TAGCAATGCC
GATCGTAGCG ACGAACTGGA CTACATTGCA ACAGTTTATA ACGGTGTCGA CGGCAAGGAT
TTTCCTTTCG AGAGAAACCC GCAAGACTAT CTCCTGTTTT TCGGACGTAT CCATCCAGAG
AAGGGAACGC TGGAAGCGAT TCAGATAGCC CGAGAGTCAG GGAAAGTCCT GCTAATAGCG
GGGCTGATTC AGGACGATGC CTATTTCGAG CAAAAGATCG AGCCCTGCGT CGATGAAAGA
TCAGTCTTTT ATATTGGGAA CGTCGGGCCA TCCGAGCGGA AAACGTTACT CGGAAAGGCG
CTCGCTCTGC TTCACCCGAT TCAGTTCGAC GAACCTTTCG GTTTAAGCGT CGCTGAATCG
ATGTTTTGCG GTACACCGGT GATCGCCTTT AACCGTGGCT CGATGTGCGA GCTGATTGTC
GACGGGAAAA CCGGGTTCCT GGTCCATACA ATCGGTGAGG CCGTTCAGGC TGTAAAAAGG
GTTGCACAGC TTGACAGGCA GGAATGCCGC CAATGGGCGA AGGCGATGTT TTCGAAAGAA
AAGATGGTGG ACAATTACAT GAGCGTCTAC GAAGAAATTC TCCGGCGTTA G
 
Protein sequence
MRVAILSSIA WRTPPRQYGP WEQVASYLTE GLVEKGVDVT LFATTDSMTT AKLEGTSHAP 
YAEDREVDPK VAECLHISHL MENASRFDLI HNHFDFLPLT YSKLIPTPML TTIHGFSSPK
IRDVYRKYNG SCFYASISNA DRSDELDYIA TVYNGVDGKD FPFERNPQDY LLFFGRIHPE
KGTLEAIQIA RESGKVLLIA GLIQDDAYFE QKIEPCVDER SVFYIGNVGP SERKTLLGKA
LALLHPIQFD EPFGLSVAES MFCGTPVIAF NRGSMCELIV DGKTGFLVHT IGEAVQAVKR
VAQLDRQECR QWAKAMFSKE KMVDNYMSVY EEILRR