| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5144 |
|---|
| Symbol | |
|---|
| ID | 8228751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6212158 |
|---|
| End bp | 6212862 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644932992 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_003089509 |
|---|
| Protein GI | 255038888 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAA AAAAGAGCGA AAATCCGAAA GTGATCATCA ATTGGCACGA TGACGACAAA
CCCCGCGAAA AATTCATGAA CAAAGGCCGC GCCGCGTGCT CCGACGCCGA GCTGATGGCC
ATTCTGATCC GTGCCGGAAC CACCCATATG ACGGCCGTGG ACCTCGCGAA GTCCATTATG
ACCTCGGTGG GCAACAACAT TAACGAACTG GCGAAACTGA ATGTCAGGGA CCTGACGAGA
ATCAAGGGCA TCGGCGAGGC GAAGGCGCTT ACCATCCTGG CCGCATTGGA ACTCGGTCGC
CGCCGGAGCG ATATCGTGCG CGACAAAAAA CGGAAAATCA ACGGTTCGCA GCCGGTGTAT
GAAGCCATGC GGCCGTACCT GATGGACAAA ACGCACGAAG AATTCTGGAT TTTGCTGCTC
AATCGCGGCA ACTGCGTGAT GCGCGCCGTA CAGGTGAGTG TGGGCGGCAT TTCGGGCACT
GCCACGGACA TTAAAATGAT CTTCAAAATC GCCCTCGATC ACATGGCCAG CTCGGTGATT
CTGGTGCATA ACCATCCTTC CGGCCAGCTC GTGCCCAGCA TGGCCGACCG CCTGCTGACC
TCGCAAATCA AAGAGGCAGG CCGATTGCTC GACCTGCCCG TTCTGGACCA TATGATCTTT
ACCGATGACG GCTATTACAG TTTCCTCGAT TCCGGGGAAA TGTGA
|
|---|
| Protein sequence | MPRKKSENPK VIINWHDDDK PREKFMNKGR AACSDAELMA ILIRAGTTHM TAVDLAKSIM
TSVGNNINEL AKLNVRDLTR IKGIGEAKAL TILAALELGR RRSDIVRDKK RKINGSQPVY
EAMRPYLMDK THEEFWILLL NRGNCVMRAV QVSVGGISGT ATDIKMIFKI ALDHMASSVI
LVHNHPSGQL VPSMADRLLT SQIKEAGRLL DLPVLDHMIF TDDGYYSFLD SGEM
|
|---|
| |