Gene Dfer_5140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5140 
Symbol 
ID8228747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6208679 
End bp6209323 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content53% 
IMG OID644932988 
ProductPhosphoglycerate mutase 
Protein accessionYP_003089505 
Protein GI255038884 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGAA AATCGATTTA CCTTATTCGC CACGGTGAAA CTGATTTTAA TCGCAGGGGA 
GTTGTTCAGG GAAGTGGTGT TGACTCCTTG CTGAATGAAT GGGGAGAGGC TCAGGCCGCA
GCTTTTTTCA ATGCTTATCA ACATGTTCCG TTTGACAAAG TTTATACCTC CGATTTAAGA
CGAACACATC AAACGGTCGC CGGGTTCATC AGGCGCGGCA TCCCCCACGA AAGCTACGCC
GGGCTGAACG AAATATCCTG GGGCGACCGG GAAGGGCGCG AACCTAACAC CGGCGACAAC
AACTACTACC GCGAGCTGGT GAATGCCTGG AAAACCGGGC AGGTGGAGCT CGCAGCCGAA
GGGGGAGAAA GTCCCGTGCA GGTGCGCCAG CGCCAGATTC CCGTGATCGA AACGATCCTC
TCGCGCCCGC ACGAAAGAAA TATCCTCATT GCCATGCACG GCCGTGCCAT GCGCGTGCTG
CTGACGACGC TTTTCAACGA GCCGCTCGTA CGCATGGACG ATTACGAGCA CAGCAATCTT
TGCCTCTACA AAATCAATTA TTCCTACGAT ACCGGGCAGT TCGAACTGGA AGTATCCAAC
GACATCACAC ACCTGCTTTC GATCGAAATT CCGCAAACGA TATAG
 
Protein sequence
MKRKSIYLIR HGETDFNRRG VVQGSGVDSL LNEWGEAQAA AFFNAYQHVP FDKVYTSDLR 
RTHQTVAGFI RRGIPHESYA GLNEISWGDR EGREPNTGDN NYYRELVNAW KTGQVELAAE
GGESPVQVRQ RQIPVIETIL SRPHERNILI AMHGRAMRVL LTTLFNEPLV RMDDYEHSNL
CLYKINYSYD TGQFELEVSN DITHLLSIEI PQTI