Gene Dfer_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5139 
Symbol 
ID8228746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6208168 
End bp6208593 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content51% 
IMG OID644932987 
Productthioesterase superfamily protein 
Protein accessionYP_003089504 
Protein GI255038883 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTTA AAAGCGCCAC CCTCGGATCA CTTCAATCTT TCGGAACAAA TACCATCGCC 
GGCCATATCG GAATCGAGTT TACGGAAATC GGAACGGACT ATATCTCAGC GCGAATGCCG
GTGGATAAGC GTACGCACCA GCCTTTCGGC ATTTTGCACG GCGGGGCGTC GGTAGTGCTT
GCGGAGACGC TCGGGAGCAT CGCTTCGTTT TTATGCATTC CTGAAAATGA AAATAAACAC
GCCGTAGGGC TGGAAATCAA TGCAAATCAC CTCCGGCCCG TGAAGGAAGG CTACGTGCAC
GGAACTGTCC GACCGATCCA CGTCGGCCGG ACCACCCATA TTTGGGACAT TCGCATTACC
AATGAAGAAA ACAAACTCGT TTGCATAAGC AGACTTACAG TCGCTATTGT GAATGCAGAC
CGCTGA
 
Protein sequence
MFVKSATLGS LQSFGTNTIA GHIGIEFTEI GTDYISARMP VDKRTHQPFG ILHGGASVVL 
AETLGSIASF LCIPENENKH AVGLEINANH LRPVKEGYVH GTVRPIHVGR TTHIWDIRIT
NEENKLVCIS RLTVAIVNAD R