| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5137 |
|---|
| Symbol | |
|---|
| ID | 8228744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6205626 |
|---|
| End bp | 6206729 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644932985 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_003089502 |
|---|
| Protein GI | 255038881 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTTA TCGCCAGATC TGCCCGTGCA GAAGGACTGC CAAATTTAAC CAAACCTCTG
TCTTCACTTT TCATTGTCGG CTCTCTCTTC ATTACGCTTT CCTGCGGAGA AAAAAAGGAT
ACTTTTCAAC AAAAAGGCGG CGGCGGACCG ACCATCGTCG ATGTGATCGT TGCGAAGTCC
GAAAAGGTCA GTGATAAAGT CGAAGTCAAC GGCACCATCG TGGCCAACGA GTTCGCCGAA
TTACGGCCCG AAGTAAGCGG ATTACTTACC TTCCTCGACG TTCCTGAGGG CAAAACAGTC
CAAAAAGGAA CCGTCATCGC CAGAATCAAC AATGCCGACC TGCTCGCACA GCTGAACAGG
TCCAAAATAC AGCTGGACCT GGCCGAAACA ACAGAAAAGC GGCTGAAACA GCTCATCGCG
GTGAATGGCA TCAACCAGGC CGATTACGAC CTGGCCGCCA ACAACGTCAA TACCCTCAAA
GCCGATATGG CCTACACCCA GGCGCTGATC GACAAAACGA TCATCAAAGC GCCGTTTACC
GGAGTGGTAG GCCTGCGAAA AGTCAGCGAA GGCGCTTATG TGACCCCACA GAGCATTATC
GCCACCATGC AGCAGCTTTC CAACCTGCGC ATTGATTTTA CCATTCCCGA AAGTTACCAG
CAATACATCA GCAAGGGCGG CACCGTAGAA GTCATGCTCG ACCAGGCCTC GGGCAAGTAC
GAAACGGCCC GCGTACTGGC AATAGAGCCA CAGGTGAACC AGACCACCCG CAATCTCACT
GTCCGCGCGG TGCTGAGTTC GGGCAACACC AGCCCCGGCT CATTCGCCAA GGTGTACATC
ACGGCCAGCA ATAACAAGAA TAGCATACTT ATTCCCTCCA ACAGCATTAT TCCCGAAGCA
CGCAGCAAAA AGGTCGTGAC CGTGAAGGGC GGCAAAGCCG TTTTTGCGCA GGTAGAAACC
GGCGACCGCC GGGAAGATGT GGTGGAAGTG ACGAAGGGCC TCAATGTAGG CGATACGGTG
GTTGTCTCGG GCGTACTTTT TGCCCGGCCC GATGCTCCTG TGAAAGTGAG AAGTGTACGA
AACCTGAATG TGGCGAGTAA GTAA
|
|---|
| Protein sequence | MNVIARSARA EGLPNLTKPL SSLFIVGSLF ITLSCGEKKD TFQQKGGGGP TIVDVIVAKS
EKVSDKVEVN GTIVANEFAE LRPEVSGLLT FLDVPEGKTV QKGTVIARIN NADLLAQLNR
SKIQLDLAET TEKRLKQLIA VNGINQADYD LAANNVNTLK ADMAYTQALI DKTIIKAPFT
GVVGLRKVSE GAYVTPQSII ATMQQLSNLR IDFTIPESYQ QYISKGGTVE VMLDQASGKY
ETARVLAIEP QVNQTTRNLT VRAVLSSGNT SPGSFAKVYI TASNNKNSIL IPSNSIIPEA
RSKKVVTVKG GKAVFAQVET GDRREDVVEV TKGLNVGDTV VVSGVLFARP DAPVKVRSVR
NLNVASK
|
|---|
| |