| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5135 |
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| Symbol | |
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| ID | 8228742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6201116 |
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| End bp | 6202462 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932983 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003089500 |
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| Protein GI | 255038879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTCGC TCACCGTTTT AAAAAAATAC AAACATACAT TCTTCCTTCT CCTGCTCTGC
TCCGGGCCTG CAATGGCCGG CATCCCCGGA GCGGGCTCGC CCGCAGACAC CCTCGCGCTC
ACGCTAGACG AGGCGGTTGC CACGGCTTTG AAAAACAGCT ACGAAATTGA AATTGCCAAG
AACAACGTAG AGGCAAACAC CATCCTGAAC AACTACGGCG TGGCGGGCGG CTTACCGACG
GTGGCCTTGA ACGCTACCAA TACCGAGCAG ATCACCCAGG TGTACCAGAA ACTGAACAAC
GGCACGGAGA TCAGCCGTAA CGCGGCAGCG GGTAATAACA CGCAGGTGAA CCTCGCGGCA
GGAATGCTGC TGTACAACGG AAGGCGTGTG GTAGCTACAA AAAAACGGCT GGCCGAACTG
CAATATCAAA GTGCGGAAGT CCTTAATTCG CAAATCCAGA ACACGATCGC GCTCGTGATG
ACGAGCTATT ACGATGTCGT GCGGCAGCTG AGCTACATCA ATACCATCCG CACCTCCATT
GTCGCGTCCG AAAAGCGGCT CGAAATCCTG CGCGTACGCA AGGAAGCCGG AATGGCCAAT
AATGCGGATA TTTTCCAGGC GGAAATCGAC CTGAACACGC TGAACCAGAC ATTGCTCAAC
CAGCAAATGG TAGCGCAGGT GGCGAAAACG GAATTGCTCC GCACGCTCAC GCTTGATCCC
AAGTCGGCGG TGACGATCAA GGACACGATC ACGGTGGATA ACAATATGCA GCTGGCGTCC
GTCCTCGATC GCCTTGCCGC CAATGCCGAT ATTCAGGCAG CAGACCATCA GATCAGGATT
AATGAACTGA TTGTGAGAGA AACGGCTGCA TTGCGCTATC CTACGGTCCG TTTCAATGCA
GCATACAACT TCTCCCGCAA CCAGACGGCC GCAGGTTTCA CCTTGCTCAA CCGCGTGGTC
GGCCCGCAGG CGGGGATAAC GCTGGCTGTT CCGATTTACA ACGGATCAGC GTTTAAGCGG
CAACGGCAGG CGGCCGAAAT CGATACGAAA AATGCGCATT TGCAGAAAAA TACATTGATG
CGCGATTACA GCGCTAATGC CGTCAAAATG TACCAAACCT ACCAGAGTTC GATCGAACAG
CTCGAAACCC AGAAGAAAAA CTACTCGCTC AGCAAGCAGC TGCTCGACCT TACGCTGCAA
CGCTTCGAAC TGATCCAGGC GACGATTATC GACGTGCGTG AGGCGCAACG CAGCTTCGAA
GAGGCCGGAT ATCGCCTCAT CAACCTCAAC TATGCAGCCA AAGCAGCCGA AATTGAGCTA
AAAAGAATCA GCAACACGCT TCAATAA
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| Protein sequence | MGSLTVLKKY KHTFFLLLLC SGPAMAGIPG AGSPADTLAL TLDEAVATAL KNSYEIEIAK
NNVEANTILN NYGVAGGLPT VALNATNTEQ ITQVYQKLNN GTEISRNAAA GNNTQVNLAA
GMLLYNGRRV VATKKRLAEL QYQSAEVLNS QIQNTIALVM TSYYDVVRQL SYINTIRTSI
VASEKRLEIL RVRKEAGMAN NADIFQAEID LNTLNQTLLN QQMVAQVAKT ELLRTLTLDP
KSAVTIKDTI TVDNNMQLAS VLDRLAANAD IQAADHQIRI NELIVRETAA LRYPTVRFNA
AYNFSRNQTA AGFTLLNRVV GPQAGITLAV PIYNGSAFKR QRQAAEIDTK NAHLQKNTLM
RDYSANAVKM YQTYQSSIEQ LETQKKNYSL SKQLLDLTLQ RFELIQATII DVREAQRSFE
EAGYRLINLN YAAKAAEIEL KRISNTLQ
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