| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5130 |
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| Symbol | |
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| ID | 8228737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6194437 |
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| End bp | 6196869 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932978 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003089495 |
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| Protein GI | 255038874 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCG CTATGGCCAC CGCCGTCATG AAGAAACTAT TGCTGATCGT TTCATTCCTC
GCATTACCAG GCTTTCAGCT CCTGGCGCAG GATGAACCTG CACACACCTA CCCCATTACC
GGTAAGCTTG AAGATTCGGA CAAAAAACCG GTCCCCTTTG CCAATGTCGC GCTCCTCGCA
GCGCGTGATT CCGCATTGAT CGGCGGCGGC ACCGCCGATG AAAACGGTCT TTTCAACATT
CCTGCCGAGC CGGGCAGCTA CCTGCTCAAA ATTACCTTTC TGGCTATGGA CGAAAAAATC
GTCCCTAACA TCCGCGTGGC GGCGCAGCCC GTGGCCCTAG GCACGATCAC CCTTACCTCC
AACGCCCGCG TGCTGGAAGA GCTCGTGGTG CAGGGCGAAA AAAGCCAGAT GGACCTTCAA
CTCGATAAAC GGGTTTTTAA TGTAGGCAAA GACCTTGCGA ATATTGGAGG CAATGCGTCG
GATATCCTCA ACAATATGCC GTCGGTGACC GTGGATGTGG AAGGTAACGT GGCATTACGC
GGAAGCGGGA ATGTCCGCAT TCTGATAGAC GGCAAGCAGT CGGGTATGGT CGGGCTCAAC
CCGGCCGAGG CGCTGCGGCA AATTCCGGCG GATCTGATAG AAAGCGTGGA GATCATCACC
AACCCGTCGT CGCGCTACGA CGCCGAGGGG GAAGTGGGGA TCTTGAATAT TGTCATGAAA
AAAAATATCC GCTATGGGCT AAACGGGACA TTTACGGGAA CGGCCGGCTA TCCTTCCAAC
TTCGGGGCGT CGTTCAATGT GAACTACCGC AGAAAGAAGG TGAACCTGAT CGCAAATTAC
GGCTGGATGT ACCGCGACGG CCCTGGCCGG GGACATTCCA GGCAGGAATA CAACAGCGCC
GACACCAGCT TCGTGTATGA GCAAACCAAC CGCCGCAACC GCGCCGGCTA CTCCAACAAC
GTCCGCGTAG GCCTCGATTA TTTCCTGAAC AACTACAACA CCATCACGGC CACCCTCTCC
TACCGCCGCT CGCAAAACGA CAACAAGTCG CAGCTCGAAT ACCGCGACTT TGACATGAAC
AACCTACTCA CCCGCACCGT CACACGTACG GAGAATGAAA CCGAACCGCG GACGAACATC
GAGGCGGCGT TCAATTACGT AAAGACGTTT GAGAGAAAAG GGCAAAGCCT GACTTTCGAC
GCGAAATACA TTCTGAGCGA CGAAACGGAG GCATCGCGGT TCCGTGAGGT GGCTAACAAC
AATTCGGTTG ATATCCGCCA GCGATCGTAC AACACCGAAG ATGAGAAGAA CTTCCTCGCC
CAGTTGGATT ACATTCACCC GTTTGGCAAG GACGGCAAGG TGGAAGCCGG GTTAAAAACC
TCCATCAGGC TGCTGGACAA TGATTTTTCG GTGCACCAGG AGCAGGAGTC CAATTACTGG
GTAATCCTTC CGGACTTCGA CAACCGGCTG GCCTATGACG AGAAAATCCA CGCGGCCTAC
CTGATGGCCA GCAACCAGTT CGGAAAAGTA TTTGTGCAGG CCGGCTTGCG CGGAGAATAC
TCCGACATCC TGACCGAACT GAAAAAGACC GGTGAGACCA ATCACCGCCG GTATTTCAAC
CTCTTCCCAA GCATTCACTT ATCCTACAAG CTGCAAGACG CGCAAACTTT GCAGCTCAGT
TACAGCTACC GCCTGAGCCG CCCGAGCTTC CGCGATCTGC TCCCATTCTC AAATTTTAGC
GATTCCCGCG TTTTCCGCGC CGGTAACCCG CTGCTGAACC CCGAGTTCAC GCATTCATTC
GAGGCAGGGC ATTTGATTAA TATGGAAAAG GGGACATTGC TTTCCAGCAT TTACTACCGC
CGCAGGCTGG GTGTGGTGGA GAACATTACT TCGGTCGACT CTACCGGTTT CACCACCATC
ACCCCCATTA ACCTCGCCAC AGGCGATTCG TACGGATTTG AATTCAACCT CACTTATGAC
CCTGCACCGT GGTGGAAACT GACGGCCAAT GCGAATATTT TCAGGGCGAT GAACGAGGGT
TATTATAACG ACAGGCTGTA TTCGAGCGAC ACTTATTCCT GGACGAGCCG GTTATCGTCG
CGTGTCACAT TGTTCGGGTC TGTTGACTTC CAGACGTCGT TCAACTACCG CGCGCCGAGG
CGTACCACGC AGGGAAAAGA CCTGTCCATT TACTTTATCG ACCTCGGTTT ATCCAAAGAT
ATCCTCAAAG GCCGCGGCAC CCTCACGGCG AGCGTCCGCG ATTTACTCAA TTCACAAAAA
CGACGCAGCA TAACCGAGAA TGCAGGCTAT TACTCCTATT CGGTATTCCA ATGGCGGCCA
CGACAGTTTC TGCTGACATT TTCATACCGC CTGAACCGCT CGAAGGAAAA GCAGAACTTT
GAAAAGGGCG GCGAAATGGG TGATGAAGAG TAA
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| Protein sequence | MPGAMATAVM KKLLLIVSFL ALPGFQLLAQ DEPAHTYPIT GKLEDSDKKP VPFANVALLA
ARDSALIGGG TADENGLFNI PAEPGSYLLK ITFLAMDEKI VPNIRVAAQP VALGTITLTS
NARVLEELVV QGEKSQMDLQ LDKRVFNVGK DLANIGGNAS DILNNMPSVT VDVEGNVALR
GSGNVRILID GKQSGMVGLN PAEALRQIPA DLIESVEIIT NPSSRYDAEG EVGILNIVMK
KNIRYGLNGT FTGTAGYPSN FGASFNVNYR RKKVNLIANY GWMYRDGPGR GHSRQEYNSA
DTSFVYEQTN RRNRAGYSNN VRVGLDYFLN NYNTITATLS YRRSQNDNKS QLEYRDFDMN
NLLTRTVTRT ENETEPRTNI EAAFNYVKTF ERKGQSLTFD AKYILSDETE ASRFREVANN
NSVDIRQRSY NTEDEKNFLA QLDYIHPFGK DGKVEAGLKT SIRLLDNDFS VHQEQESNYW
VILPDFDNRL AYDEKIHAAY LMASNQFGKV FVQAGLRGEY SDILTELKKT GETNHRRYFN
LFPSIHLSYK LQDAQTLQLS YSYRLSRPSF RDLLPFSNFS DSRVFRAGNP LLNPEFTHSF
EAGHLINMEK GTLLSSIYYR RRLGVVENIT SVDSTGFTTI TPINLATGDS YGFEFNLTYD
PAPWWKLTAN ANIFRAMNEG YYNDRLYSSD TYSWTSRLSS RVTLFGSVDF QTSFNYRAPR
RTTQGKDLSI YFIDLGLSKD ILKGRGTLTA SVRDLLNSQK RRSITENAGY YSYSVFQWRP
RQFLLTFSYR LNRSKEKQNF EKGGEMGDEE
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