| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5122 |
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| Symbol | |
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| ID | 8228729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6185071 |
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| End bp | 6186666 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932970 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_003089487 |
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| Protein GI | 255038866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.535643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.522042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATT TACAAGAAAT TAAGAAGCGC CGCACGTTTG CGATCATCAG TCACCCCGAT
GCCGGGAAAA CCACGCTGAC GGAAAAGCTG CTCCTTTTCG GGGGCGCGAT CCAGACGGCA
GGGGCGGTGA AATCCAATAA GATCAAGAAA ACGGCGACTT CCGACTTTAT GGAGATCGAG
AAGCAGCGCG GTATCTCGGT GGCGACGTCG GTAATGACTT TTGAATACAA AGACCTGCTG
ATCAACATCC TCGATACGCC GGGCCACAAG GACTTTGCCG AAGATACTTA CCGCACGCTC
ACGGCGGTGG ACAGCGTAAT CCTCGTGGTG GACTGCGTGA AGGGCGTCGA GGAGCAAACC
GAGCGCCTCA TGGAAGTTTG CCGCATGCGC AATACGCCGG TGATCGTGTT CATCAACAAG
CTCGACCGCG AAGGGCAAAA CCCGTTCGAA TTGCTCGACG AGCTGGAAAG CAAACTAAAT
ATCCGGGTTC GTCCGCTTAC CTGGCCGATT AATATTGGGG CCAATTTCAA AGGCGTTTAC
AGCTTGTACG AGCAAATGCT GTATTTCTTC AAAATCAACA AAACCAAAAT CGAGGCGGAC
GTCGCGAAGG TGAACCTTGA AGACGAGAAA TTGGAAGAAT TGCTTGGTGA AAGAGATGCC
AATCAGCTGA CAGAGGACGT GGAGCTCGTA GAAGGCGTTT ACGATGCATT CTCGGAGGAA
GCGTATCAGA AAGGCCAGCT CGCGCCGGTT TTCTTCGGAA GTGCGATCAA TAACTTTGGT
ATCAAGGAGT TGCTGGACAC ATTCTGCGAG ATTTCGCCCA TCCCGCAACC GCGCCCGACC
GACGTACGCG AGGTGGAGCC AACGGAGCCT AAATTCACCG GTTTTGTATT TAAAATCCAC
GCCAACCTCG ATCCCCGCCA CCGCGACCGC ATTGCGTTTC TACGCATTTG TTCGGGGAAA
TTTGAAAGGG GTAAATTCTA TAAACATGTT CGTTTGGGCA AGGACGTGCG TTTTTCCAGC
CCATTCACCT TCATGGCTTC GGACAAGAGC GTGATGGACG AAGGCTTCCC GGGCGATGTG
GTCGGTTTGT ACGACACCGG TAACTTCAAA ATCGGCGATA CATTGACCGA AGGCGAAGCC
CTGCAATTCT CGGGAATTCC GAGCTTCTCG CCCGAGATTT TCAAAGAGCT GATCAACATG
GACCCGATGA AATCCAAGCA ATTGGAAAAA GGCATCCAGC AGCTCACCGA CGAAGGTGTG
GCGCAGCTCT TCACCCTCGA TTTAGGCAAT AGAAAAATCG TAGGTACGGT TGGAGAACTC
CAATTTGACG TAATCCAATA TCGACTTGAA CACGAATATG GCGCCAAATG CCGCTGGGTG
CCGATGAATA TTTCCCGCGC CTGCTGGCTC ACCGCCGACG ACAAGCCGGC CATGGACCAG
TTTGTCCGCC TCAAAGGCAA CCAGATCGCC TATGACAAGG ACCGCAACCC GGTTTTCCTT
GCCGAATCCG AATGGATGAT TCGTATGAAC CGCGAAAACA ACCCCGCCAT TCACTTCCAT
TTTACATCCG AGTTTAAGAC TGAAATGGCA TTGTAA
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| Protein sequence | MSNLQEIKKR RTFAIISHPD AGKTTLTEKL LLFGGAIQTA GAVKSNKIKK TATSDFMEIE
KQRGISVATS VMTFEYKDLL INILDTPGHK DFAEDTYRTL TAVDSVILVV DCVKGVEEQT
ERLMEVCRMR NTPVIVFINK LDREGQNPFE LLDELESKLN IRVRPLTWPI NIGANFKGVY
SLYEQMLYFF KINKTKIEAD VAKVNLEDEK LEELLGERDA NQLTEDVELV EGVYDAFSEE
AYQKGQLAPV FFGSAINNFG IKELLDTFCE ISPIPQPRPT DVREVEPTEP KFTGFVFKIH
ANLDPRHRDR IAFLRICSGK FERGKFYKHV RLGKDVRFSS PFTFMASDKS VMDEGFPGDV
VGLYDTGNFK IGDTLTEGEA LQFSGIPSFS PEIFKELINM DPMKSKQLEK GIQQLTDEGV
AQLFTLDLGN RKIVGTVGEL QFDVIQYRLE HEYGAKCRWV PMNISRACWL TADDKPAMDQ
FVRLKGNQIA YDKDRNPVFL AESEWMIRMN RENNPAIHFH FTSEFKTEMA L
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