Gene Dfer_5119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5119 
Symbol 
ID8228726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6182497 
End bp6183219 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID644932967 
Productmethyltransferase small 
Protein accessionYP_003089484 
Protein GI255038863 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.454528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA ACGCCCATTT CCGTTTCAAG CAGTTCACGG TCCGGCAGGA CCAGTGTGCG 
ATGAAAGTGT GTACCGACGC CTGCGTCCTC GGCGCATGGG CGGATGTGGA GGACGCCGAC
CGCATTCTCG ACATAGGGGC CGGAACGGGC CTGCTCTCGC TCATGGTTGC GCAGCGCAAC
ACGTACGCGA TGATCGACGC TGTGGAAATT GATGCGGAGG CGTTTTACCA GGCCGGTGAA
AATGTGGAAC AAAGTCCGTT TCACGACCGC ATTACGCTTT TCCATTCGGC GGTGCAAGAA
TTTGTGTCCG AGCACCGGTA TGACGTGATC ATTACCAACC CGCCGTTTTT CCAGTCGGAC
CTGCTTTCGC CGATTGATAA GAAGAATATC GCCCATCATG CCAAATCCCT TGATTTTGAG
GAATTACTGA CGGCTATTGA GCGGCTTTTG AAGCCGGAAG GTAAATTCAA CATTCTTTTT
CCGGTAGACG AAGGCAGTCG CTTCGCAGAG AAAGCGGCAC ATGCTGGCTG GAAACTGACC
CGGAAACTGA CATTGTTTCA TCAGGAAGAC AAAAAAGCAT TCCGCCTGCT GATGCGCTTT
GAGCGTGCGG AAGTTGCTCA TAATGTGATC GTTGAGCCTG ACTTGTATAT TTATGAAAAA
GATGGTGTGA CGCATGATCC GCGTTTCAGG GAATTGCTAA AAGCTTTTTA TTTGAAATTT
TGA
 
Protein sequence
MPRNAHFRFK QFTVRQDQCA MKVCTDACVL GAWADVEDAD RILDIGAGTG LLSLMVAQRN 
TYAMIDAVEI DAEAFYQAGE NVEQSPFHDR ITLFHSAVQE FVSEHRYDVI ITNPPFFQSD
LLSPIDKKNI AHHAKSLDFE ELLTAIERLL KPEGKFNILF PVDEGSRFAE KAAHAGWKLT
RKLTLFHQED KKAFRLLMRF ERAEVAHNVI VEPDLYIYEK DGVTHDPRFR ELLKAFYLKF