Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5114 |
Symbol | |
ID | 8228721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6178591 |
End bp | 6179304 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644932962 |
Product | NUDIX hydrolase |
Protein accession | YP_003089479 |
Protein GI | 255038858 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.32433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATTAG ATATTTTAAA GCAATACCAG GCCCAGACGA AATGTCTGGT TGCGCTGGAT TCTATCATTT TTGGTTTTGA TGGCGAAGAG CTCAAATTGT TGTTGGTAAA AAGGGGCATT GAAGACGAGC ATCACACATG GTCGCTTATG GGCGGCTGGG TACAACCCGA CGAAAGCCTC GAAGGCGCAT CGTCCCGCAT CCTGTTTGAA TTGACCAATC TCACCGACAT TTACCTCGAA CAACTTTACA CATTCGGAAG TCCCCAGCGC GATCCCGTTG AGCGAACGGT GTCAGTCGCC TATTTCGCAC TCATTAATGT GGAGGATTAC GACCATAAGA TTTCCAAAAA CTTCGAAGCG CAGTGGTTTT CGATGCAGGA ATTGCCTAAG CTGCTCTTTG ACCACGGCAT GATGGTCGAA ATGGCTATTC AGCACCTGCG TTACAAGGCC TCGCAGCACC CGATCGGCTT CGAATTGCTG CCTGAAAAGT TCACGATTCC CCAGTTGCAG AAATTGTACG AAGCGATTTT CGGAACGGAG CTGGATAAGC GCAATTTTAG CCGTAAACTC TTGTCAACCA ACTTGTTGAT AAAACTGGAC GAGAAGCAGA AAGGCTATTC CAAAAAGGGC GCGTATTTCT ACAAAATCGA CGAGGAGAAA TATAAAAAGC AGTTTAATAC CTTCCTGAAC TTCCTGCCGG GAAGCGCTTC TTAG
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Protein sequence | MRLDILKQYQ AQTKCLVALD SIIFGFDGEE LKLLLVKRGI EDEHHTWSLM GGWVQPDESL EGASSRILFE LTNLTDIYLE QLYTFGSPQR DPVERTVSVA YFALINVEDY DHKISKNFEA QWFSMQELPK LLFDHGMMVE MAIQHLRYKA SQHPIGFELL PEKFTIPQLQ KLYEAIFGTE LDKRNFSRKL LSTNLLIKLD EKQKGYSKKG AYFYKIDEEK YKKQFNTFLN FLPGSAS
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