| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5106 |
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| Symbol | |
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| ID | 8228713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6167469 |
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| End bp | 6169325 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932954 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_003089471 |
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| Protein GI | 255038850 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.390237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCA ACCATACCAA AGAAACCCTG CAAACCAGGG GTATTCTCCT CCTCATTCTG
ATCGCCGGCC TTGCATTAAG GCTTTATCAA CTCGACCGTT ACAGTATTTT TTTCGACGAA
GTGAGCACAT TGCTCGTCAG CCAGGGAATA GTACTCGAAG GGGCGAACCA GAAAGAAGTC
TTTTCGAGCG TTGAACTGGC AGATTCGTAT TTCTGGAAAA CGCCCGCGCA CCCGCAGAAG
CAAGTGCTCC GCACTTTTAC CGCCAACGAA CTTTATCATC CCAAAGCATT CACGCCCGCG
GAATTCTGGG CGCCGAAGTC AATCGCGGAT TATTATGAAG CGATGACGCG CAGCGACATC
GGGAACAGTC CGTTCTATTA CCTGCTTTTA CACCCCTGGA TTGACCTGAT CGGCATTTCC
GACTTTTCGA TACGGCTGTT TTCAGTCATT TTCAGCCTGC TCATTATCGG TGTAACGTAT
CTTTTTGCAA GACGGTTTTT CGGCATCACC ACCGGATTGA TAGCAGCGGG CATCACGGCC
ATCGAGCCGT TTTTTATCGC TTACAGCCAT CAGGCGCGCA ACTATTCGCT CACATTCTTC
CTGACGCTCA CAGCTACTTA TTTCTTTTTA CAAATCATTG AAAACAAGCC GGAAAAACGG
AATGTGATCT GGCTTTACGT CGGTTACATC TTATCGGCCG GATTGGGCCT GCTAAGCCAT
TTCCTCGTGA TTTCGGTGCT GCTGGCGCAC GCATTGTACG CTGTATTTTT CCTGAGAACG
ATCAAAGGCT GGATCAGGAT GGCCATTGCG GCGGTGTTTA CGCTTTCGGG TGTAACCTGG
TGGCTGATGT TCGGAGGGGG CGTCTACACG TTGTCGTCGT TGCAGCACCA GGCGGAGAGA
TACCGGTACC AGGCCGAAAC GGGCGGACAG GCTTTCGGCA ATATCCTGCC TGCAACGCCT
TTGAATGTCT TCAACAAATC GCTGCCGATT TTTTCCGATC TCATCCTGTT CACCAATGGC
CTGGCCGATG CATTGGGCGG TAAGAAAAAC GTGGCCGTAG CGTTGCTGGC GGCATTAATA
CTTATTTGCT GGTATCGTTT CAAGGACAAA ATCAACACAC CGGCCTGGCT TACTCCACGC
TTTCCGTATC TGCTGATCAT TTTCGTGGGT TTGTTTTACA ATAACCACAA ATTACAGTTC
AGCATCCTCA GCGTCAGCCT GTTTGCATTA TCCTTCATTC CCGATTTACA CAAAAGCGCC
GACCGCCAGC AGCGGGCGCG GCTCTGGATG TTGTACATGA TGGCGCTCGT GCCCACACTG
TTCCTCATCC TGATGTCGTT CAAAAACGGG CACACTTACG GGATCATGCA GCGGTATTCC
GGGTTCTCAT TCCCTTATGT GATCATCCTG CTCAGCCTCT TGCTGCAATT TTATACGACA
TTGCAGGTCG AGTTCCGGGT GCTGATATTC GTGTTCCTCG CCGCGCAGCT CTATTTTGTC
GGGTTGAGAT TACAGGAATT CTATGAAGAC CGCTCACCGA AGTACGGCTA TTTCGCCGTG
CCACGTGTGC CGAATCCTTA CATGGAAGCT GCAAAAAAGA TCGAAGCGGC TTACCAGCCG
GGCGACACTA TTTATTACCC GGCACCGCGT TACGAGATCC TCTCCGAAAT GGACCGGACA
TTCCTGCCCT ATTCAATCCA CGACGCGCAA ATCACCAATC TGTACTTCCC CAAGGATGCG
CAATATGTGC AGGTAATGGA TATGAACCAG ACAGAACGCA TCTGGATCAA AAAGCAAGGG
CGCAACGAGC CTTTGGAAAT CATGAAATTG AAAGGCAAAC GGTACGGATT TGAGTAA
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| Protein sequence | MSPNHTKETL QTRGILLLIL IAGLALRLYQ LDRYSIFFDE VSTLLVSQGI VLEGANQKEV
FSSVELADSY FWKTPAHPQK QVLRTFTANE LYHPKAFTPA EFWAPKSIAD YYEAMTRSDI
GNSPFYYLLL HPWIDLIGIS DFSIRLFSVI FSLLIIGVTY LFARRFFGIT TGLIAAGITA
IEPFFIAYSH QARNYSLTFF LTLTATYFFL QIIENKPEKR NVIWLYVGYI LSAGLGLLSH
FLVISVLLAH ALYAVFFLRT IKGWIRMAIA AVFTLSGVTW WLMFGGGVYT LSSLQHQAER
YRYQAETGGQ AFGNILPATP LNVFNKSLPI FSDLILFTNG LADALGGKKN VAVALLAALI
LICWYRFKDK INTPAWLTPR FPYLLIIFVG LFYNNHKLQF SILSVSLFAL SFIPDLHKSA
DRQQRARLWM LYMMALVPTL FLILMSFKNG HTYGIMQRYS GFSFPYVIIL LSLLLQFYTT
LQVEFRVLIF VFLAAQLYFV GLRLQEFYED RSPKYGYFAV PRVPNPYMEA AKKIEAAYQP
GDTIYYPAPR YEILSEMDRT FLPYSIHDAQ ITNLYFPKDA QYVQVMDMNQ TERIWIKKQG
RNEPLEIMKL KGKRYGFE
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