| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5104 |
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| Symbol | |
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| ID | 8228711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6164537 |
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| End bp | 6166531 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932952 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003089469 |
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| Protein GI | 255038848 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.581709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATC ATTTACCGGT TTACCGCGAT AAAATAGAGA AATTAAAAGG GCCAGTTTTT
GTTTTCGGTG CCAGCGGCTT CATTGGCGCC AATCTTTTCA ATGATATTTT CAAAATCCGG
AAGGATTGCT ACGCAGTCAC GCACGACGCC ACCAAAGCAT GGCGCCTGAA ACTGCTGAAT
GTACCTTTTG AAAACATCAT TCACTGCGAT ATCCTTTCGG ACAATTCGAT TAAGGAAGTA
TTTGAAAAAT ACAAACCGCA AACCATATTC AACCTCGCTG CCTACGGGGC TTACAGCAAG
CAGAGCAATG TGAACCTGAC CTACGAGACG AATGTGCTCG GAACGGTGAA CATCCTGCAA
AACTGCTCGA AGGAGATGGT GTATATCCAC GCCGGAAGCA GCTCCGAATA TGGTTTCAAC
TGTACGTCTC CCAAAGAAAC CGACCGCGTG GAGCCAAACA GCCATTACGC GGTTTCCAAG
GTTTCGGCGG CGTATCTGCT GGAATATTAT GCCAAAGTAG CCGGGCTGAA AACACTAAAC
CTTCGCCTGT ACTCGATTTA CGGGTACTGG GAAGAGCCGG ACCGCCTGAT CCCGCGGCTG
ATCGAGAATG CCCGTAAAAA GGGCCTGCCA TCGCTCGTGT CGCCGGATAT CAGCCGCGAT
TTTGTGTTTG TAGAAGACTG CGTGGAAGCG TTCCTGGATG CGGCATTGAA TATCAACGAC
GAAAAGTCGG GACGCTCGTA TAACATTGCT ACCGGCCGGA AAACAACCAT GGGCGACCTC
GTGGAAGTGA CCCGCACGGC GTTCGCGATT GCGAAAGAGC CTGAATGGGG CAGCATGTCC
AACCGCAAAT GGGACCTCGC CGATTGGTAC GGCGACCCTT CGGCGTTTGA AAAAGACTTC
GGCTGGGAAG CCAGAACATC GCTCGAAGAC GGTCTGAAAC GTTACAGCCA GTGGCAGGAT
GCCATTCAGT ACGAGGCGCG CGTCATTCCC GCTTTCGAAA ATCCGAAGCT CAATCCGGTC
ATCACGGCGA TCATCGCGTG CTACAAGGAT GCGCAGGCCA TTCCGTTCAT GTACGAAAGG
TTGGTGAAGA CTTTCAATGA ATTGAAGGTG CGCTACGAGA TCATTTTTGT GAACGACAGC
TCACCGGACA ACCAGGAGGA GGTGATCAAT GCGATTTGTG ATAAAGACCC TAATGTAGTG
GGGATCAGCC ACTCGCGAAA TTTCGGATCG CAGTCGGCAT TCCTGAGCGG GATGGAGATC
GCTACCGGCG ATTGCGTGGT GCTGATGGAC GGGGATTTGC AAGATCCGCC TGAGATTATC
CCCGCATTTT ACGAAAAATG GATGGATGGC TACGACGTCG TGTACGGCGT TCGCGTGCAG
CGCGAGATGA AGCCGCATAT TCATTTCTTC TACAAATCGT TTTATAAGGT GTTCCAGGGG
CTGAGCTACA TACCTATCCC GCGCGACGCA GGCGATTTTT CGATGATCGA CCGGAAAGTG
GTGAAAGAGC TCGTGGACCT GCCCGAAACG GAACAATTCC TGCGCGGGCT GCGTGCCTGG
GTTGGTTTTA AACAAACCGG CGTGCCGTAT GTGCGGCCGG AAAGGATGTT CGGCGTGTCC
ACCAACAACT GGACGAAGAA CATCTGGTGG GCCAAAAAGG CGATCTTCTC ATTTAGTTTC
GCGCCATTGG AACTGATGAG TTATGCGGGT TTCGGCCTCA CGGGCTTGTC CATTCTGGGG
ATCATCTGGC AAATATTCGC CAAGTTTTTC TTCTTCCCGG ATACGCCACG AGGCCTCAGC
ACCGTCATTA TCCTGATCGT TTTCTTCGGC GGATTAACGA TCCTCGGCAT TTCGTTTTTG
GGAGAATACA TTACCAAGAT ATTTGAAGAG ACCAAGAAAC GGCCGAAATA CATCCGCACC
AGAATACGCC GCGGCCCGAA AGCCTATAAA ACGGCCGACG AGATCCGCGC TCTGGTGAAG
CAATTGAGAA AGTAG
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| Protein sequence | MLDHLPVYRD KIEKLKGPVF VFGASGFIGA NLFNDIFKIR KDCYAVTHDA TKAWRLKLLN
VPFENIIHCD ILSDNSIKEV FEKYKPQTIF NLAAYGAYSK QSNVNLTYET NVLGTVNILQ
NCSKEMVYIH AGSSSEYGFN CTSPKETDRV EPNSHYAVSK VSAAYLLEYY AKVAGLKTLN
LRLYSIYGYW EEPDRLIPRL IENARKKGLP SLVSPDISRD FVFVEDCVEA FLDAALNIND
EKSGRSYNIA TGRKTTMGDL VEVTRTAFAI AKEPEWGSMS NRKWDLADWY GDPSAFEKDF
GWEARTSLED GLKRYSQWQD AIQYEARVIP AFENPKLNPV ITAIIACYKD AQAIPFMYER
LVKTFNELKV RYEIIFVNDS SPDNQEEVIN AICDKDPNVV GISHSRNFGS QSAFLSGMEI
ATGDCVVLMD GDLQDPPEII PAFYEKWMDG YDVVYGVRVQ REMKPHIHFF YKSFYKVFQG
LSYIPIPRDA GDFSMIDRKV VKELVDLPET EQFLRGLRAW VGFKQTGVPY VRPERMFGVS
TNNWTKNIWW AKKAIFSFSF APLELMSYAG FGLTGLSILG IIWQIFAKFF FFPDTPRGLS
TVIILIVFFG GLTILGISFL GEYITKIFEE TKKRPKYIRT RIRRGPKAYK TADEIRALVK
QLRK
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