Gene Dfer_5097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5097 
Symbol 
ID8228704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6154949 
End bp6156205 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content52% 
IMG OID644932945 
Productsodium/hydrogen exchanger 
Protein accessionYP_003089462 
Protein GI255038841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0161414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.674736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGT ATTACTCATT TTCTGCCCTG ATCGTTCTCT CTGCGATATT TTCCTACCTC 
AATTCCCGGT TTCTGAAACT GCCTCCTTCC ATCGGTGTGA TGGTGATCGC GCTCATGGTT
TCGCTCGGGC TTATAGCGAC GGATAGCATA TTTCCGCGGA CATTTATCCG CATTTCTACA
CTCATCGCGA GTGTGGACCT TACCGAAATC CTCATGGGCG CCATGCTCAA CTTCCTGCTT
TTTGCGGGCG CGATCCATTT GCACCTGGAA GACCTGCGGG AACAACGGCT GCCGGTGATC
ATTTTCTCGA CGGTGAGCGT GGTCATTTCC ACGTTTGTCA TCGGTTTCCT GATGTTCTAC
ATTTTGCCAT TATTCGGCAT CGCCATCCCG CTGATCCAGT GTCTCGTTTT CGGCGCATTG
ATCTCACCAA CCGACCCTAT TGCGGTGCTT GGTATTCTCA AACAGGCCGG CGTTCCCAAA
TCGCTGGAAA CCAAAATTGC AGGCGAATCG CTTTTTAATG ACGGTATGGC GGTTGTGGTT
TTCATTTTGA TGCTTGCGCT GGCGCGGGGA GAAGAGGTTA ATACTTCGTT CACGGGCATT
GTGGGGCTGT TTGTAAAAGA GGCATTAGGC GGGATTTTGC TCGGCTTGGT GCTGGGTTTT
TTAGGTTCCA AAATGATGTA CCGGGTGGAT GGCTACAATG TGCACGTGCT GATTACGCTT
GCGATCGTGA TGGGCGGCCA TTTGGCGGCG CAGGCATTGC ACATGTCGGG CCCGCTGGCG
ATGGTAGCGG CCGGTTTGGT GGTGGGGAAT TATGGTAAAA ACCCGGGAGC GGTTTCCGAA
ACCGAGCGGG ATTATATTGA TAAATTCTGG GAGCTGATCG ACGAAATCCT GAATGCGATC
CTTTTCATGA TCATCGGATT TGAGCTGCTG CTCATCCCGG ATCTGAAGCA ATACGGCTGG
GCGGGCTTAG CGGCAATTGT CGTGGTACTT TCAGCACGGT TCATATCCAT TTACATTCCA
GTGCGACTGA TTCCCTTCAA AACGCGCTTC GGTAAGAAGT CGATTACGAT ATTGGTGTGG
GGAGGTTTGC GCGGTGGCGT GTCCATTGCA TTGGCGCTGT CAATCGACTC GGAGCTGAAC
AAGGACGTGC TGCTGGCGAT TACCTATTTT GTAGTATTGT TCTCGATCAT CGTGCAAGGT
CTCACCGTAG GCAAGCTCAC CAACCGCCTT CCCGACGAAG AAGAGGCCCC GGCCTAG
 
Protein sequence
MELYYSFSAL IVLSAIFSYL NSRFLKLPPS IGVMVIALMV SLGLIATDSI FPRTFIRIST 
LIASVDLTEI LMGAMLNFLL FAGAIHLHLE DLREQRLPVI IFSTVSVVIS TFVIGFLMFY
ILPLFGIAIP LIQCLVFGAL ISPTDPIAVL GILKQAGVPK SLETKIAGES LFNDGMAVVV
FILMLALARG EEVNTSFTGI VGLFVKEALG GILLGLVLGF LGSKMMYRVD GYNVHVLITL
AIVMGGHLAA QALHMSGPLA MVAAGLVVGN YGKNPGAVSE TERDYIDKFW ELIDEILNAI
LFMIIGFELL LIPDLKQYGW AGLAAIVVVL SARFISIYIP VRLIPFKTRF GKKSITILVW
GGLRGGVSIA LALSIDSELN KDVLLAITYF VVLFSIIVQG LTVGKLTNRL PDEEEAPA