Gene Dfer_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5077 
Symbol 
ID8228684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6134103 
End bp6136280 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content53% 
IMG OID644932925 
Producthypothetical protein 
Protein accessionYP_003089442 
Protein GI255038821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.215198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTACGTA CCTTTATCCT AACCCCTTTC ATCTTCTGTT TCATCATTTT TCAAAGCATT 
GCACAGAAAC CGAACGAAAA TTACCAGTAC CATATCCATT CGGCTGTTTC GCCTGTCAAA
GTCGATGGCG TAGCCGATGA CGCCGCGTGG TCGGCGACGG AAACCGCGAA GGACTTTTTC
ATGATCACGC CGATGGATAC CAGCTTTTCC AGGGCGCTGA CGGACGTGAA AATGTGTTAT
GACAAACACA ACCTTTACAT CCTGGTTGTC AACTACAAAC CGGTAAAAGG CGGGCTGATC
GTGGAATCCC TGAAACGCGA TTTCGCATTT GGGAAGAACG ACAACTTCCT CCTTTTCATG
GACACCTTTG ATGACAAGAC CAACGGTTTT TCATTCGGTG CCAATGCTGC CGGCGCTCCC
TGGGATGGCC AGCAGGGCGA TGGCGGCACG GTGGACCTCA GCTGGGACAA CAAATGGGTA
AGCGCCGTCA AAAACGAGGA CGACAAATGG GTTTGGGAAG CGGCCATTCC CTTCAAAAGC
ATCCGCTACA AACCGGGCAT CACGCGCTGG GGTATCAATT TCAGCCGCCA GGACCTGACC
ATCTCCGAAA AATCCTCGTG GGCGCCCGTT CCGCGGCAGT TTCCATCCGC CTCGCTCGCT
TACACGGGCG TGCTGGTGTG GGACGTGCCG CCGCCCACGC CCGGACCGAA CATTTCGGTG
ATCCCCTACG CGGCCATGCG GATGACGAAG GATCATCAGA ACGACATTCC TACCAAGTAC
AAACCGACCA TTGGCGGTGA CGTCAAAATC GGACTCACGC CGTCGCTTAA CCTCGACCTG
ACCGTCAACC CCGATTTCTC GCAGGTGGAT GTGGACGTGC AGCAGACCAA CCTCGACCGT
TTCGAACTGT TTTTTCCCGA ACGCAGGCAG TTTTTTCTCG AAAACGCCGA CCTTTTTGCC
AATTTCGGGT ACGCTACCAT CCGGCCGTTC TTCTCGCGCC GCATTGGCCT CGGAGTACCG
ATCCAGTTCG GAGCCAGGAT GAGCGGAAAG ATCAATAAAA ACTGGCGCAT TGGTGTGCTC
GACGTGCAAA CGGGCTCCAA CGACACGCTC ACGCCGCATA ATAACTACGC CGTGTTCGCA
TTGCAGCGGC AAGTGCTCGC CCGCTCGAAT GTGCGGTTCA TTTTCGTGAA CAAGGACGCG
ACTAACTACA CCACGGAAAG GCACTCGGCC TCGAACCGCT ATAATCGGAA CATCGGCGCG
GAGTTCAACC TCGCGAGCGC CAAAAACCTG TGGACGGGGA AAGTAATGTT CCTGAAATCG
TTCACACCGG GCCGGTCGTC CGATGATTTT ACGCACGCGG CCGATTTGAA ATTCACCAAA
GCCAACCTCA TCTGGCAATG GCAGCATGAA TATGTGGGTA AGAATTACAA TGCGGAAGTA
GGCTACGTGC CCAATGCCGT TCGGAATGGC TATTACAAGA TCAGTCCGAA TGTCGCTTAT
CTGTTCTTCA TCAAGCATCC CAAAATCATC AGCCACGGGC CGAAACTTGT GAACAATACT
TTCTGGGACA AGAATTTCGA TTTGAGCGAT CGCGAGTTCA TTTTGTCCTA CAATGTAAAC
TTTATCAACC GCGCCACTGT GGCCGTTTGG GGTTCGAGCA ATTATGTGCG CCTCCTCCGC
CCTTTCGATC CTACCAACCT GGGCAATGCT ACATTGGCCA CGGGCACGGA GCATAACTGG
AAAGCCGTCG GTTTCGATAT CGTCTCCGGT CCGCAAAACC GCTTTACCTA CCTGGCATCG
GGTATTTTAG GGGGTTACTA CCAAAACGGC AAGCGCAACA ACCTGCGCGC CGAGCTGGGC
TACCGCGTGC AGCCTTATGT CGCCATTACC ATGGCCGGTA ACTACAACGA TATCCGCCTT
CCAGAGCCGT GGAAACGCAC GCAGCTCTGG CTCGTAGGCC CGCGCGTGGA CGTGACATTC
ACGAACAACC TGTTTTTCAC GACATTCATG CAGTACAACA ACCAGGCCGA CAATATAAAC
CTGAATGCCC GTCTGCAATG GCGCTACAAG CCCGCGTCCG ATTTGTTCAT CGTGTATACA
GACAACTATC TGCCCGAGAA CTTCAAGGTC AAAAACCGGG CAATCGTGCT GAAATTCACC
TATTGGTGGA ATCTTTAA
 
Protein sequence
MLRTFILTPF IFCFIIFQSI AQKPNENYQY HIHSAVSPVK VDGVADDAAW SATETAKDFF 
MITPMDTSFS RALTDVKMCY DKHNLYILVV NYKPVKGGLI VESLKRDFAF GKNDNFLLFM
DTFDDKTNGF SFGANAAGAP WDGQQGDGGT VDLSWDNKWV SAVKNEDDKW VWEAAIPFKS
IRYKPGITRW GINFSRQDLT ISEKSSWAPV PRQFPSASLA YTGVLVWDVP PPTPGPNISV
IPYAAMRMTK DHQNDIPTKY KPTIGGDVKI GLTPSLNLDL TVNPDFSQVD VDVQQTNLDR
FELFFPERRQ FFLENADLFA NFGYATIRPF FSRRIGLGVP IQFGARMSGK INKNWRIGVL
DVQTGSNDTL TPHNNYAVFA LQRQVLARSN VRFIFVNKDA TNYTTERHSA SNRYNRNIGA
EFNLASAKNL WTGKVMFLKS FTPGRSSDDF THAADLKFTK ANLIWQWQHE YVGKNYNAEV
GYVPNAVRNG YYKISPNVAY LFFIKHPKII SHGPKLVNNT FWDKNFDLSD REFILSYNVN
FINRATVAVW GSSNYVRLLR PFDPTNLGNA TLATGTEHNW KAVGFDIVSG PQNRFTYLAS
GILGGYYQNG KRNNLRAELG YRVQPYVAIT MAGNYNDIRL PEPWKRTQLW LVGPRVDVTF
TNNLFFTTFM QYNNQADNIN LNARLQWRYK PASDLFIVYT DNYLPENFKV KNRAIVLKFT
YWWNL