| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5076 |
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| Symbol | |
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| ID | 8228683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6132688 |
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| End bp | 6134106 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932924 |
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| Product | leucine-rich repeat-containing protein typical subtype |
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| Protein accession | YP_003089441 |
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| Protein GI | 255038820 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.597323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCTG TCATGAAACT AATCTTCACT TGTTTACTTC TTGTCGCAGG CGTCGGCCTG
GCGGCTCAGC CTGTGGTGGT GAACCAAAAG GACGTTTCCA AAGATCTTGC TCAGAAATTG
CTTAAGGAAT ACCAGAATGT GGAAGGTGAG GTGAATGAAA AGCCGCACAC CGTACAAACG
GCATTCGAAC GGATTTACAA AGAAGTCCTT GAAACGGACA AGATCCAGGA ATACACGGTT
TGGAATAAGC TTTATCTGAA TGCCGAGGGC AAGATCGACT ACCTCGTGTT GTCCGTCTCC
CGTGGTTTCG GGATGGTGGA TGAAAAGACG GCCAAGGAGC CTTCCAAGGC CGATTCGCTG
GCGGCGCTGG TTACCTCCCG GGTTGCCCCT TATCTCACCG ATTTTGTGTC AAGAAGAACT
GTCGGCTCCA AAACAGCAAT CCTGGTATTT GTGAGTTTCT TTACGCGTCC AGCGAAGGAG
GTCGCTAAGA AGGATAGTGT CGTGAATGGC CTGGCGGAGG CAATGGCGGC GAAGGATACA
TTGAAAGTGA AGACGCTCGC GCTCGGACAA AACCTGCTTA CGGCCGTTCC TGATGTAATA
TACCGTTTCC CTAACCTCGA AGAGCTGTTT TTAAGCGATA ACGACATTGA GACCGTAAAT
CTGGACGTGG CACGCCTGCC CAAACTGCGC CATCTCGACC TGAGCAAGAA TATTATCAAG
GATAATGGCA TTGCCATCAG CAAAAACAAA TCCCTGCAAC TGCTCAATCT ACAAAAGAAC
TTCGTTACGG ACATTCCCCG CGCAGCCCGC AATTGTAAGA AACTGGAAAC GCTCTGGCTG
GGCAACAACC GGATAAGCGG GCTGAGTAAT GCCAGTTTCC GGAAATTGAA ACCGGTGAAA
GACCTGAATT TTTACAAATC CGAAATAGCC GTCCTGCCGC GGGGAATTCG TAAACTGCGC
CGGCTGGAAG TGCTGGATTT GTATTATAAC AAACTGGAAA CACTGCCGAA ATCGGTCACC
AGGCTGAAAC GCCTCACGCA CCTGGCCGTA TCCCATAACC AGCTCTCGGA ATTACCGGCC
CGGATTGACC GCATGAAACG CGTCCATACG ATCTATGCGC ACCATAACCA CCTGAGCAAG
CTGCCCGACC GCATTACGCG TATGCAGTCG CTGCGGATAG TGGATTTGGG TTACAACTGG
CTTACCACCT TCCCGGCCCA GCTCGCCGCG TTCACCAACT TGGAGGAACT CGACCTATCG
GCCAACAACT TCCCCGATTT CCCGGTACAG TTGTTGCAGA TCCGCAAGCT CGACAAGCTG
CATTTACGCG GCAATCCTTT CCTGGGAGAG GACGCCGAGC GTAAATACAG CGAGCAGCTA
AGCCAGCTCA AAAAGAAGAA TATTGAAGTG TTTTATTAA
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| Protein sequence | MLPVMKLIFT CLLLVAGVGL AAQPVVVNQK DVSKDLAQKL LKEYQNVEGE VNEKPHTVQT
AFERIYKEVL ETDKIQEYTV WNKLYLNAEG KIDYLVLSVS RGFGMVDEKT AKEPSKADSL
AALVTSRVAP YLTDFVSRRT VGSKTAILVF VSFFTRPAKE VAKKDSVVNG LAEAMAAKDT
LKVKTLALGQ NLLTAVPDVI YRFPNLEELF LSDNDIETVN LDVARLPKLR HLDLSKNIIK
DNGIAISKNK SLQLLNLQKN FVTDIPRAAR NCKKLETLWL GNNRISGLSN ASFRKLKPVK
DLNFYKSEIA VLPRGIRKLR RLEVLDLYYN KLETLPKSVT RLKRLTHLAV SHNQLSELPA
RIDRMKRVHT IYAHHNHLSK LPDRITRMQS LRIVDLGYNW LTTFPAQLAA FTNLEELDLS
ANNFPDFPVQ LLQIRKLDKL HLRGNPFLGE DAERKYSEQL SQLKKKNIEV FY
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