| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5060 |
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| Symbol | |
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| ID | 8228667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6115299 |
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| End bp | 6117707 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932908 |
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| Product | MutS2 family protein |
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| Protein accession | YP_003089425 |
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| Protein GI | 255038804 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01069] MutS2 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.766824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTACC CCAATACATT AGAACAAAAA CTGGGATTCG ACAAGCTGAG GGAACGATTG
AAGGAGCTTT GTATCAGCTC TTTGGGTCAG GGTTTTGTTG AAAAAATCCG GTTTTCCGAG
AATTTCGGCA TGGTGGAAAA ACTGGTGAGC CAGACCGCCG AAATGCAGCG CATCCTGGAA
CTGGGCGAGA ATTTCCCATC CCAGAATTAC ATCGACGCGA CGCCTTATCT GAAACGGGCA
TCCATTGAAG GAATGCTGCT CACGCAGCCC GAGTTTTCGG ATTTAAAAGT GTCGCTGCTT
ACGATCCGGC TTTGCCTGCG CTTTTTTGAA AGCCAGGAGG CCGATGCATT CCCTATCCTG
GGTGAGTATG CCAAAACAAT CAGGGTCGAA AAGGCCGTTA CCGACGCCAT CGACCGCATT
ATCGACGACC GCGGGCAGAT CCGCGACTCG GCGTCGTCCG AGCTTTCGCG CATTCGCAAA
CGACTGATTT CCGAGCAGGC CGGCATTCGT AAGAAACTGG ATACCATCCT CAAATCCGCC
AGAAGCAATG GCTGGATCGG CGACGATGTG TCGCTCACCG TCCGGAATGG CCGCATGGTA
ATTCCCGTCG CCGCTGAGCA CAAGCGGAAG CTGCGCGGAT TTATCCACGA CGAATCAGCC
ACCGGGCAAA CCGTTTTCAT CGAACCGACG GATGTTTTTG AGTCCAACAA TGAAATCCGC
GAACTCGAAT ACGAGGAACG CCGCGAGATG AACCGCATTT TGCACGAATT GACGGCCTAT
ATCCGTCCAT TCGTGCCCGA TTTGCAAAAG GCTTACGGTT TCCTGGGCCT AATGGATTTC
CTGCGCGCGA AAGCAAGGCT GGCCGGTGAG ATGGGCGCGA TTAACCCGCC GTTTGAAAAT
CGCCAATTTA TCGACTGGCG CGAGGCGCGG CATCCTTTGC TACATTTGTC GTTTCAAAAG
CAGGGTAAAA AGGTCATTCC GCTGAACATT GAATTGCAGG AAAAGCAGCG CATTCTCATC
GTTTCCGGGC CGAATGCGGG TGGAAAGTCC GTGGCTTTGA AAACGGTGGG ATTAATCCAA
TATATGTTTC AATGCGGGCT GCTGGTGCCG ATGCTGGAAG GTTCTTCAAT GGGCTTTTTC
CAGAATATCT TCATCGATAT CGGTGACGAG CAGTCGCTGG AAAATGACCT GAGTACGTAC
AGCTCGCACT TGACCAACAT GCGCCATTTC CTTTCCATGG CCAACAAGCG GACGCTGTTC
CTGATCGATG AATTCGGAAC GGGAACTGAA CCAGGGCTGG GCGGCGCCAT TGCGGAAGCC
ATCCTGGAAA ACCTGACCAA ATCGGGCGCA TTCGGGATGA TTAACACGCA TTATACCAAT
CTGAAAGTGC TTGCGGACAA AACGGAAGGG CTGGTGAATG GGGCGATGCG CTTCGATGGC
GAGCATCTGG AACCGCTGTA CCAGCTCGAA ATCGGTCGGC CGGGCAGCTC ATTCGCATTT
GAAATCGCTT CCAAAATCGG GTTACCGAAG GCTGTGGTGG CACGCGCGAA GGAAAAGCTG
GGCACGCAGC AGGTGAATTT TGAAAAACTC CTGAAAGAGC TCGACATCGA ACGGCGCGTG
TTTGCGGAGA AGAACATTGA AATAGGCATT AAGGAACGCA AGCTGACCAA GCAGGTCGCC
GACTACACCG CATTGAAAGA GAAACTCGAA AACAACGAGA AAAAGATCGT CAATGAAGCG
AAGCAGAAGG CCAAAAACCT GCTTTCGGAT GCGAATCAGC TGATCGAGAA TACCATTCGG
GAGATCAAGG AAAACAAAGC CGAGAAGGAA AAGACCAAAA CGGTGCGGAC CACGCTTGAA
AATTTTGGCA AAAACAACCT GAAACTCGCC GAAGTGACCG AAAGCCAACC CGCCGAGGAA
GAATACGAAC CGGAAGGCGG CGATATTACT CCGGGCAGTT ATGTGCGTAT AAGCGGACAA
ACGGCCATTG GCGAAGTATT ATCGGTGAAG GGCAAGGACG CGGAAATCCG CATTGGCGAC
CTGAAATCAA ATGTGAAGCT GAACCGCCTC GAAAAAGTAT CCCGCAAAAC CTACCGCGCG
GCTACGGGCG ATAAGGGCAT TAAGGCCGCT TACAGGGGCG TAGATATGAA TGAGCGCATG
CTCAATTTCA GCTTTAATCT CGACATGCGC GGCAAACGCG GCGAGGAGGC ATTAGGCCTT
GTAGACCAGT TTATGGACAA TGCCATTATG CTCGGGTACG ACGAGCTGCG GATTGTACAC
GGCAAGGGCG ACGGCATCCT GCGCACCCTC GTGCGCAACC ACCTGCGCGG GTACAAGCAG
GTAGCGGGCA TGTACGACGA GCACGCCGAC CGCGGCGGTG CGGGCGTGAC GATCGTTAAG
TTGAAATAG
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| Protein sequence | MLYPNTLEQK LGFDKLRERL KELCISSLGQ GFVEKIRFSE NFGMVEKLVS QTAEMQRILE
LGENFPSQNY IDATPYLKRA SIEGMLLTQP EFSDLKVSLL TIRLCLRFFE SQEADAFPIL
GEYAKTIRVE KAVTDAIDRI IDDRGQIRDS ASSELSRIRK RLISEQAGIR KKLDTILKSA
RSNGWIGDDV SLTVRNGRMV IPVAAEHKRK LRGFIHDESA TGQTVFIEPT DVFESNNEIR
ELEYEERREM NRILHELTAY IRPFVPDLQK AYGFLGLMDF LRAKARLAGE MGAINPPFEN
RQFIDWREAR HPLLHLSFQK QGKKVIPLNI ELQEKQRILI VSGPNAGGKS VALKTVGLIQ
YMFQCGLLVP MLEGSSMGFF QNIFIDIGDE QSLENDLSTY SSHLTNMRHF LSMANKRTLF
LIDEFGTGTE PGLGGAIAEA ILENLTKSGA FGMINTHYTN LKVLADKTEG LVNGAMRFDG
EHLEPLYQLE IGRPGSSFAF EIASKIGLPK AVVARAKEKL GTQQVNFEKL LKELDIERRV
FAEKNIEIGI KERKLTKQVA DYTALKEKLE NNEKKIVNEA KQKAKNLLSD ANQLIENTIR
EIKENKAEKE KTKTVRTTLE NFGKNNLKLA EVTESQPAEE EYEPEGGDIT PGSYVRISGQ
TAIGEVLSVK GKDAEIRIGD LKSNVKLNRL EKVSRKTYRA ATGDKGIKAA YRGVDMNERM
LNFSFNLDMR GKRGEEALGL VDQFMDNAIM LGYDELRIVH GKGDGILRTL VRNHLRGYKQ
VAGMYDEHAD RGGAGVTIVK LK
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