| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5051 |
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| Symbol | |
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| ID | 8228658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6102517 |
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| End bp | 6103497 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932899 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003089416 |
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| Protein GI | 255038795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.517247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA TTTTTTGCCT GGCACTTTTG GCAGGATTGA TGACAGGTTT GACGAGTGCC
CGGGCCAAGG GATTGAATGC TGTCGACTCC GTGGGGGTTG AAAAGGTAGG AGGAAAGATT
TTTGTTCTAC ATAAGGTAAA CCAGGGCCAG ACGATGTTCG CCGTCGTACG CCAGTACGGC
ACGACCATTC ACGCATTGCG CGAAGCCAAT CCCGGCATGA GCGACAATAT CCAGTCCGGA
CAAACGATCC GCGTGCCTTA CACCCCGAAG GTTTCCAAAA AGGATTCCAA AAAAGAGGAA
AAGAAAGAAC TTGTAAAGGC TGAGGTGAAG GAAACGAAGC CTGTGGCCGA AACGCCTGCA
CCGGTAGTGA CCAGCACAGC CGCGCCATCC GGCCCGCCCG CACCACTGCC TTCCAATGGA
GTTCACAAAG TGGAGCCTGG ACAGACACTA TACCGCGTAG CAGTAAAATA CGGCGTGCTA
ATGGCCGATC TGCGCAAATG GAACAACCTC ACAGACGATA ACTTGAAAGA CGGACAGGAG
CTGATCGTTA GCGAAAAAGG TTCAGAAAAA GCGGCTGCAC CGACGGTGAC GCCTCCGGCG
CCCAAAGTGG CTACTACGGT TGTAAAAGAT TCGGTGAAAG CCAAAACAGT CGTTCCCGAA
AAAGTAGTTA AGCCGGTTGA AGAAGTAGCG CCTCCGAAAG TGGTGAAAAG CAAGAAGAAG
TCGGAATCGG GCTTGGCGGA AGTGATTGAA ACAGATGAAA GTACGAGCAA ATTCCTTGGC
TTGCACCGTA CTGCGCCGGT AGGCTCGCTG GTGGAGGTTT TGAATGAATA TAATCAGGAG
AAAATCATCG TCCGCATCAT CGGCCGCATT CCCGACACCA GTGTGAACGA CGACATTGTG
ATCAAACTTT CGTCGCGCGC ATTTGAAAAA GTTTCCCCCA ACAGCAAACG ATTCAGGGCC
GTAGTGAGTT ATCTCGAGTA A
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| Protein sequence | MKYIFCLALL AGLMTGLTSA RAKGLNAVDS VGVEKVGGKI FVLHKVNQGQ TMFAVVRQYG
TTIHALREAN PGMSDNIQSG QTIRVPYTPK VSKKDSKKEE KKELVKAEVK ETKPVAETPA
PVVTSTAAPS GPPAPLPSNG VHKVEPGQTL YRVAVKYGVL MADLRKWNNL TDDNLKDGQE
LIVSEKGSEK AAAPTVTPPA PKVATTVVKD SVKAKTVVPE KVVKPVEEVA PPKVVKSKKK
SESGLAEVIE TDESTSKFLG LHRTAPVGSL VEVLNEYNQE KIIVRIIGRI PDTSVNDDIV
IKLSSRAFEK VSPNSKRFRA VVSYLE
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