Gene Dfer_5045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5045 
Symbol 
ID8228652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6097668 
End bp6098324 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID644932893 
Productputative translaldolase 
Protein accessionYP_003089410 
Protein GI255038789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TCATTGATAC TGCGAACCTG AATGAAATTC GGGAAGCGCA GGCACTTGGT 
GTTTTGGACG GTGTGACCAC CAACCCATCT TTGATGGCAA AAGAAGGAAT TACAGGTAAG
GATAATATAA TGCGTCACTA CAAGGCTATC TGCGACATCG TAGATGGTGA TGTAAGCGCG
GAAGTGATCT CGGTTGATTT CGAAGGAATG GTTCGCGAAG GCGAAGAACT GGTGGAAATC
GACGAGAAAA TCGTGGTTAA AATCCCGATG ATCAAAGAAG GTATCAAGGC TTTGAAATAT
TTCTCTTCAA AAGGCATCCG TACCAACTGT ACATTGATTT TCTCTGCGGG ACAAGCGCTC
GTAGCTGCGA AAGCCGGTGC TACTTACGTT TCTCCATTCG TAGGCCGCCT GGATGATATC
TCTACCGACG GTATCGGCCT GATTGAGCAA ATCCTCACCA TTTACAGAAA CTACGGGTTT
GATACGCAAG TACTTGCAGC ATCAGTTCGT CACCCAATGC ACATTATCCA ATGCGCAGAA
GTAGGTGCTG ATGTAATGAC CGGCCCATTG AGCGCAATCG AAGCATTGCT GAAACACCCA
TTGACGGATA TCGGTCTGGA AAAATTCCTT TCTGACTACA AAAAAGGGAA TTCTTAA
 
Protein sequence
MKFFIDTANL NEIREAQALG VLDGVTTNPS LMAKEGITGK DNIMRHYKAI CDIVDGDVSA 
EVISVDFEGM VREGEELVEI DEKIVVKIPM IKEGIKALKY FSSKGIRTNC TLIFSAGQAL
VAAKAGATYV SPFVGRLDDI STDGIGLIEQ ILTIYRNYGF DTQVLAASVR HPMHIIQCAE
VGADVMTGPL SAIEALLKHP LTDIGLEKFL SDYKKGNS