| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5040 |
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| Symbol | |
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| ID | 8228646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6092985 |
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| End bp | 6095042 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932888 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003089405 |
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| Protein GI | 255038784 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA ACGATAACAA AAGGGGGCCA CTCAACCCTA AAAGTCCTCA GAAGGGATAT
CAAGGTTGGA TTATAGCCGC TCTGATCGCT ACTATACTCG GAATCACGTA CCTTAACCGC
ACATCAACCA TCCGCGAAAC CACTCAGAAA CGTTTCGAAA AGATGATGGC TGACAAGGAA
GTGGAGCGCG TTACCATTGT GAACGACAAA TCGGTGGAAG TAACGCTCAA ACCCGAAGCG
CTCAAACTCG ATAAATACAG GGTTGTTGCA AAGGAAAATA ACTATTTCGG CGGCGAAAGT
GCCTCGCATT ACCAGTTTCA GGTTACGTCT GCGGAAACCT TTAAGAAGGA TTTCGATAAA
ATGCAGGAAG GCACGCCGGA CGACGACAAG GTACCTTTTG TGGTAGATAC CCGCAACGAC
TGGACCAGTT TCCTCGGAAC CTGGGGCTTT TTCATTGTCA TGATCCTGGT GATGTACTTC
ATTCTCGGCA GAATGTCGGG TGGTGTAGGA CCGGGTGGCC AGATCTTCAA CATCGGCCGC
TCACGCGCAA CGCTTTTCGA TGCAGAAAAC AAGGTAAAGA TCACATTTAA TGATGTGGCT
GGCCTCGACG AAGCGAAAGA AGAGATCAAG GAAATTGTGG AATACCTGCA AAGCCCCGAC
AAATTCAAGA AACTCGGTGC GAAAATTCCC AAAGGTGCAT TGCTCGTAGG ACCTCCGGGA
ACGGGTAAAA CATTGCTCGC TAAGGCAGTA GCCGGTGAAG CAGGCGTGCC ATTCTTCTCC
CTGTCCGGTT CCGATTTCGT AGAAATGTTC GTGGGTGTGG GTGCAGCGCG TGTGCGTGAC
CTCTTTAAAC AAGCGAAAGA AAAAGCGCCT TGTATCATCT TTATCGATGA GATCGACGCA
GTAGGTCGTT CACGTGGCCG TGGCGCCATG CCGGGTTCGA ACGACGAACG TGAAAATACA
TTGAACTCCC TTTTGGTGGA AATGGACGGT TTCGCAACCG ACTCCGGCAT TATCATCGTG
GCAGCCACCA ACCGCCCCGA CGTTCTCGAC CCTGCATTGC TCCGTCCGGG ACGTTTTGAC
CGCCAGATTT CCGTAGACAA ACCGGACGTG ATCGGTCGTG AGGCGATTTT CAAAGTGCAT
TTGAAGCCAT TGAAACTGGC TACTGACGTT AATATCCAGA AACTTTCATC CCAGACGCCT
GGCTTTGCCG GTGCTGAAAT CGCGAACGTT TGTAACGAAG CTGCATTGAT CGCCGCCCGC
CGCAACCGCG AAGAGGTAAC CATGCAGGAT TTCCAGGATG CGATGGACCG TGTGATTGGT
GGTTTGGAAA AGAAAAACAA ACTCATTTCG CCGGAAGAGA AGCAAATCGT GGCTTACCAC
GAGGCAGGTC ACGCAGTGGC AGGCTGGTTC CTGGAACATG CCGATCCATT GGTGAAAGTG
TCGATCGTAC CACGTGGTGT GGCGGCATTG GGTTACGCAC AATATCTCCC GCGTGAGCAG
TATCTGTACC GTACCGAGCA GCTGTTTGAT GAAATGTGTA TGACATTGGG CGGCCGCGCT
GCGGAAGATG TAGTATTCGG CAAAATCTCA ACCGGCGCAT TGAGCGACCT CGAACGCGTG
ACGAAAGTGG CGTACAGCAT GGTGACCATG TACGGTATGA ACGAGCGCAT CGGTAATATT
TCATTCTACG ATTCGAAACA AACCGATTAT TCATTCACCA AACCTTACTC GGAATCGACG
TCGCAGGCGA TTGACGAAGA GGTGAGAAAG CTGGTGGACG AGGCTTACCA GTTTGTTAAA
AACCTGCTGA TCGAAAAACG TGACGCATTG GAAGTGTTGG CGAAAGAATT GCTGGAAAAA
GAAATCCTGT TCCAGGCAGA TCTCGAAAAA CTGATTGGCA AGCGTCCTTA CGAGAAGGAA
ACGAGCTACC AGGCCTATAT CAACCGCCGC TCGAATGAAG AGGCTGCGAT CCACGAAGAA
GTGGTGAAAC AGACTTTGGA AAAAGATCGT AAAGAGGAAG AGATGGCAGA GGCGGAAAAA
AGCGCCGACA ACGAATAA
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| Protein sequence | MSENDNKRGP LNPKSPQKGY QGWIIAALIA TILGITYLNR TSTIRETTQK RFEKMMADKE
VERVTIVNDK SVEVTLKPEA LKLDKYRVVA KENNYFGGES ASHYQFQVTS AETFKKDFDK
MQEGTPDDDK VPFVVDTRND WTSFLGTWGF FIVMILVMYF ILGRMSGGVG PGGQIFNIGR
SRATLFDAEN KVKITFNDVA GLDEAKEEIK EIVEYLQSPD KFKKLGAKIP KGALLVGPPG
TGKTLLAKAV AGEAGVPFFS LSGSDFVEMF VGVGAARVRD LFKQAKEKAP CIIFIDEIDA
VGRSRGRGAM PGSNDERENT LNSLLVEMDG FATDSGIIIV AATNRPDVLD PALLRPGRFD
RQISVDKPDV IGREAIFKVH LKPLKLATDV NIQKLSSQTP GFAGAEIANV CNEAALIAAR
RNREEVTMQD FQDAMDRVIG GLEKKNKLIS PEEKQIVAYH EAGHAVAGWF LEHADPLVKV
SIVPRGVAAL GYAQYLPREQ YLYRTEQLFD EMCMTLGGRA AEDVVFGKIS TGALSDLERV
TKVAYSMVTM YGMNERIGNI SFYDSKQTDY SFTKPYSEST SQAIDEEVRK LVDEAYQFVK
NLLIEKRDAL EVLAKELLEK EILFQADLEK LIGKRPYEKE TSYQAYINRR SNEEAAIHEE
VVKQTLEKDR KEEEMAEAEK SADNE
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