| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5034 |
|---|
| Symbol | |
|---|
| ID | 8228640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6087575 |
|---|
| End bp | 6089113 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644932882 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003089399 |
|---|
| Protein GI | 255038778 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.96279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACA TTGTTGATAT TCTAAATAGA CTAGGCATCC GGACCGAAAA CCACGGCGTA
ACTACCGGGA CGGCCAGCTG GGAGGGCGGC GGCGCATTAA ATGAATCGTT CTCGCCGGTG
GATGGTGCAA AAATAGGGGC GGTGCGCCAG GCTGCCAGCG AGGATTACGA CCGGGCGGTG
GAAGCGGCTG CGCTTGCATT CAAAAAATGG CGCAGCATAC CGGCGCCCAG GCGCGGAGAT
ATTGTACGGC AAATGGGCGA TCAATTGCGG GAGCGTAAGC ACGAGCTGGG TACGCTTGTC
AGTTATGAAA TGGGCAAGAG TGCGCAGGAA GGCTTGGGCG AGGTGCAGGA GATGATCGAT
ATCTGTGATT TTGCTACCGG ACTTTCAAGG CAGCTTTACG GCCTCACGAT GCACAGCGAG
CGCCCGCAGC ATCGCATGTA CGAGCAGTGG CATCCGCTGG GCATTACCGG CATTATTACG
GCGTTCAACT TCCCGGTGGC CGTATGGTCC TGGAATGCGA TGATCGCCTG GGTGTGCGGC
AATGTGTGCG TGTGGAAGCC TTCGGAAAAA ACACCGCTGA CTGCCCTTGC TTGCCAGCAA
ATTATCCTGT CTGTGCTGAG GGACAATGAC TTGCCCGAGG GCGTGTCGTG CGTGGTGACT
GGCGGCCGGG AGGTGGGTGA ATGGATTGCG CAAGATACCC GGATCGCCCT CGTGTCGGCC
ACGGGAAGCA TTCCGATGGG CCGTTCGGTA GGGGAGCAGG TGGCTCGCCG ACTGGGAAAA
AGCCTGCTCG AACTCGGGGG GAACAATGCG ATTATTGTCA CGCCCAGCGC GGATTTGAAA
GTAGCGATCC CCGCCATCGT ATTCGGCGCG GTGGGCACGG CCGGGCAGCG TTGCACATCT
ACCCGCAGGC TGATCGTCCA TGATTCTATT TTCGACGAAG TGAAAACCCG TTTGATAAGC
GCCTACGGCC AGTTAAAAAT TGGTAATCCA CTCGATCCAG CCTATCACGT CGGTCCGCTG
ATCGACCGGC ATGCGGTAAT GCAGTATGAA AAAGCCGTGG AGGAAATCAG GCAGGCGGGC
GGGACGTTTG CCGTGGAGCC GGGCGTGCTG GAAGGGAATG CTTATGCGTC GGGGTGCTAT
GTTTCGCCGT GTATTGCGGA GGTGGAAAAC CACTGGGCCA TGGTGCAGCA CGAAACTTTC
GCCCCGATCT TATATCTGAT CCGCTATCAT GATGTAGATG AGGCTATTGC CGTTCAAAAC
GATGTGCCGC AGGGTCTTTC GTCAGCCATT TTTACGATGG ATTTGCGCGA TGCCGAGCGG
TTTCTCTCGC ACACGGGCTC CGATTGCGGC ATTGCAAATG TCAATATCGG TACTTCCGGC
GCTGAAATTG GCGGTGCATT TGGCGGGGAA AAGGAAACGG GCGGCGGCCG GGAGTCGGGG
TCGGATGCCT GGAAAGCTTA TATGCGGCGG CAAACGAATA CGATCAATTA CGGAACGGCG
CTGCCATTGG CACAGGGAAT AAAGTTTGAG ATTGACTAA
|
|---|
| Protein sequence | MTDIVDILNR LGIRTENHGV TTGTASWEGG GALNESFSPV DGAKIGAVRQ AASEDYDRAV
EAAALAFKKW RSIPAPRRGD IVRQMGDQLR ERKHELGTLV SYEMGKSAQE GLGEVQEMID
ICDFATGLSR QLYGLTMHSE RPQHRMYEQW HPLGITGIIT AFNFPVAVWS WNAMIAWVCG
NVCVWKPSEK TPLTALACQQ IILSVLRDND LPEGVSCVVT GGREVGEWIA QDTRIALVSA
TGSIPMGRSV GEQVARRLGK SLLELGGNNA IIVTPSADLK VAIPAIVFGA VGTAGQRCTS
TRRLIVHDSI FDEVKTRLIS AYGQLKIGNP LDPAYHVGPL IDRHAVMQYE KAVEEIRQAG
GTFAVEPGVL EGNAYASGCY VSPCIAEVEN HWAMVQHETF APILYLIRYH DVDEAIAVQN
DVPQGLSSAI FTMDLRDAER FLSHTGSDCG IANVNIGTSG AEIGGAFGGE KETGGGRESG
SDAWKAYMRR QTNTINYGTA LPLAQGIKFE ID
|
|---|
| |