| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5021 |
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| Symbol | |
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| ID | 8228627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6073294 |
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| End bp | 6074187 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932869 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003089386 |
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| Protein GI | 255038765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.672095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACA ACGAAAAGAT TTCCCGGAAA TCGTTCCTCA AAGCCAGCGC ATTTGCATTG
GCTGCTCCCA TGTTCTCCAA ACTGAACCTG GATGTAAAGG CCCCCTCGCC AATCGGTTTG
CAACTGTACA CACTTCGTAA TGAAATATCG AAAGACCTGC TGGGCACGCT GAAAAAGGTG
TCGGCGATCG GATATAAAGA AGTGGAGCTT TACGGCTATT CTGACGGCAA ATTCTTTGGC
AAAACGGCCA AGGAAATGAA GAAGATCCTC GGCGACCTTG GTTTGAACCC TGTAAGCGGC
CATTACGGTG CCGGTGTCGA GAACAAAACC GCCAAAGGTA CATTGAGCAA TGGCTGGCAA
AAAGCAGTGG ACGATGCCGC TGAATTGGGC CAGAAGTACG TGAACTGCGC GTACCTGACC
GAATCGGAGC GCAAGACGAT CGACCAATAC AAGAGCTATG TGGACCTGTT CAACAAATCG
GGTGAAGTGG CCAAGAAAGC AGGCTTGCAA TTCGGTTACC ACAACCACGA CTTCGAATTC
AAGAAAATCG GCAGCGAGCT GCCGTACGAT TACATTGCCG GCAAAACCGA TCCCAAGCTT
GTGAAGCTCG AACTGGATTT GTACTGGATC GTGAAAGCAG GTCTGGACCC GGTTGCATTA
TTTAAGAAGT ATCCCGGCCG TTTCCCGCTG TGGCACGTGA AGGATATGGA TAAGAAAGAC
GGCTCGTTTG CCGAGGTAGG GACCGGTTCC ATTGATTTCG CCAAGATCTT CGCAAACCGC
AAACTCGCGG GCCTCACGCA TTTCTTTGTG GAGCAGGACG TGGCAAAGGT GCCGCCCGGT
GCAAGCGATC GAAACAAGCT ACAAGAATGT AGTGAAGATG AAAGTTTAGC ATAA
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| Protein sequence | MDYNEKISRK SFLKASAFAL AAPMFSKLNL DVKAPSPIGL QLYTLRNEIS KDLLGTLKKV
SAIGYKEVEL YGYSDGKFFG KTAKEMKKIL GDLGLNPVSG HYGAGVENKT AKGTLSNGWQ
KAVDDAAELG QKYVNCAYLT ESERKTIDQY KSYVDLFNKS GEVAKKAGLQ FGYHNHDFEF
KKIGSELPYD YIAGKTDPKL VKLELDLYWI VKAGLDPVAL FKKYPGRFPL WHVKDMDKKD
GSFAEVGTGS IDFAKIFANR KLAGLTHFFV EQDVAKVPPG ASDRNKLQEC SEDESLA
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