Gene Dfer_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5015 
Symbol 
ID8228621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6065406 
End bp6066338 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID644932863 
Productribonuclease BN 
Protein accessionYP_003089380 
Protein GI255038759 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.778134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAA AACTGTTGAA AAACCGACAT ATCAAGCGCC TTATCCTCTG GTTACAGCAG 
GCCATGCTGT TCCGGGGAAC GGTTTCGCTG TACGACATTA TCCTCAATCT CGTAGCGAGC
AACCGCAAGC ATGAGATCGA TCAGCGGGCC TCGGCGGTAG CTTACAGCCT CACGCTGGCC
GCATTTCCGG GGATTATCTT CCTTTTTACG CTCATTCCCT ACATCCCGAT CGAAAACCTC
GATCAGCAGA TTCTCGTGCT CCTGCGCAAC AATATGCCGC AGGGGACATT CGAAGCGGCC
GACCAGACGA TCCTCGACAT TGTGAGCCGT CCGCGCTCGG GTGTGCTTTC GCTCGGTTTT
ATATTCGCGA TGATCGCCTC TACGAATGGC ATGATGTCGC TCATGCGGTC GTTCGACATG
GTGTACGACG ACAAGGAAAC GCGTGGTTTC CTGGCCATCC GCGGCATAGC CACATTGCTC
ACACTCCTGC TGATCGCTGT GCTGTGCCTT TCGGTGGTGC TGCTGATCGT GGGCGATGCC
GTGATGAGCA TCGTAGGGGA TTGGCACATT ATCCGCGACA ACTGGCTGAT AGCCTTGCTA
AACATCCTTC GCTACCTGAT CAGCTTTGGC TCCTTAATGC TGACGATTTC GATTATCTAC
CGTTTTGCGC CTTCGCACGG GCGACAGTTT ACGTTCGTGA ATGCAGGCTC GGTAATTGCG
TCGGTGCTCA TCCTTGCGGC TACTTACGGG TTTTCCTTTT ATCTGTCGCG TTTCAGCTCC
TACAACAAGC TTTACGGGTC CATTGGCACG ATGATCGCCC TGATGATCTG GATTTATCTG
CTTGCATTTG TGATTATTCT GGGGTTCGAG ATCAATGCGA GCGTGAGCCG GGCGCGGAGC
AGAGCGGCTG CCAGGCGTGT CGTAAAGCGG TGA
 
Protein sequence
MLEKLLKNRH IKRLILWLQQ AMLFRGTVSL YDIILNLVAS NRKHEIDQRA SAVAYSLTLA 
AFPGIIFLFT LIPYIPIENL DQQILVLLRN NMPQGTFEAA DQTILDIVSR PRSGVLSLGF
IFAMIASTNG MMSLMRSFDM VYDDKETRGF LAIRGIATLL TLLLIAVLCL SVVLLIVGDA
VMSIVGDWHI IRDNWLIALL NILRYLISFG SLMLTISIIY RFAPSHGRQF TFVNAGSVIA
SVLILAATYG FSFYLSRFSS YNKLYGSIGT MIALMIWIYL LAFVIILGFE INASVSRARS
RAAARRVVKR