Gene Dfer_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5008 
Symbol 
ID8228614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6058491 
End bp6060086 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content56% 
IMG OID644932856 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_003089373 
Protein GI255038752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG TCTGGTCCTT CCTGGCATCC GTGCCAGTGT GGCTTTATAT TATCCTGGGC 
ATTGCGCTCG CGATCGCACT CAGGGATGTT TTACAAAAAA GGCACACCAT TCAGCATAAC
TTTCCGCTGG TAGGGCATTT CCGGTACATG ATCGAGAAGA TCGGGCCGGA ACTGCGCCAA
TACATTGTAG CTAACAACCG GGAAGAGCTG CCGTTCAACC GCCGGCAGCG ATCCTGGATT
TACGCTTCCT CCAAAAAAGA AAACAACTAC CAGGGCTTCG GCACCGACCA GAATATGCAG
GACGCGGGTT ATGTCCTCAT TAAGCCCTCG CTCCTGCCCT ATCGTGTGGA TACCACGCAC
AGCCACCACG TCAAAAACGG CAACGACCCG CATCATTACA CCATTCCATG CGCCAAGGTC
ATAGGCGAGT ACCACGGCCG CAAGCGTCCC TACCGGCCGC GTTCGGTTGT GAATGTGAGC
GCGATGAGCT ATGGTTCGCT GTCGGCACGG GCCATCGAAT CGCTGAATAA AGGTTCTTTC
AAATTCGGCA ACTACCATAA TACCGGCGAA GGCGGCCTGT CGCCCTATCA CAAATACGGC
GCGGATGTGG TGTTCAACAT GGGTACGTCC TATTTCGGCG TGCGCGACGA CGACGGCAAT
TTCGTAATGG AAAAGCTCGT AGCGCTTATG CGCAACAACC CGAGCGTACG CATGATCGAG
CTGAAACTAT CCCAGGGCGC CAAGCCCGGC AAGGGTGGCG TGCTGCCGGC GAGCAAGATC
ACGGCGGAAA TCGCCGAAAT CCGCGGTGTG CCGATGGGGA AAGACGTGGT TTCGCCCCCT
TATCACAGCG CATTCTCGAA TGTGACCGAA ATGGTCGACT TTATTGAGGC AATGGCCGCC
GCGACCGGCC TGCCCGTCGG GATTAAGTCG GCGGTGGGCA AAACCGACAT GTGGGAAGAG
CTCGCCGACC TGATGGTGGA GACCGGCAAA GGCCCCGACT TCATCACGAT CGACGGTGGC
GAAGGCGGCA CTGGCGCAGC ACCGCCATCG TTCGCAGACC ACGTGTCGCT GCCTTTGGTA
TTTGCATTCA GCACGGTGTA CAAAATATTC CAGAACAGGA ACCTGAACGA CAAGATCACG
TTCATCGCAT CGGGCAAACT CGGGCTTCCG GCGCAGGCCG TCATGGCATT TGCGATGGGC
GCCGACGTGA TCAACGTTGC ACGTGAAGCC ATGCTGTCGA TCGGGTGCAT CCAGGCGCAG
AGCTGCCACA CCAACCGCTG CCCGACGGGC ATTGCGACCA ACAACAAATG GCTCGAATCG
GGTATCGACC CGGCGCTGAA AAGCGAGCGG TTCAACAACT ACATGAAAAC ACTCGCCAAA
GAAATCATCG AAATCACGCA CGCCGCAGGC TATGAGCATC CTTGCCAGTT CGGAATGGCC
GATATCGACA TTTCAATGGG TGATAACAAC CGCACCATTA CGCTGGCGGA TAATTATGGT
TATCTCAAAA CCGTGGTCCC TTTCAGCGAC ATCAATGCAT TGCTCGACTG CGACCACCTC
GGAGGGCGCG ATATACCGGG TGAAAAAACA GCCTAA
 
Protein sequence
MEAVWSFLAS VPVWLYIILG IALAIALRDV LQKRHTIQHN FPLVGHFRYM IEKIGPELRQ 
YIVANNREEL PFNRRQRSWI YASSKKENNY QGFGTDQNMQ DAGYVLIKPS LLPYRVDTTH
SHHVKNGNDP HHYTIPCAKV IGEYHGRKRP YRPRSVVNVS AMSYGSLSAR AIESLNKGSF
KFGNYHNTGE GGLSPYHKYG ADVVFNMGTS YFGVRDDDGN FVMEKLVALM RNNPSVRMIE
LKLSQGAKPG KGGVLPASKI TAEIAEIRGV PMGKDVVSPP YHSAFSNVTE MVDFIEAMAA
ATGLPVGIKS AVGKTDMWEE LADLMVETGK GPDFITIDGG EGGTGAAPPS FADHVSLPLV
FAFSTVYKIF QNRNLNDKIT FIASGKLGLP AQAVMAFAMG ADVINVAREA MLSIGCIQAQ
SCHTNRCPTG IATNNKWLES GIDPALKSER FNNYMKTLAK EIIEITHAAG YEHPCQFGMA
DIDISMGDNN RTITLADNYG YLKTVVPFSD INALLDCDHL GGRDIPGEKT A