| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4994 |
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| Symbol | |
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| ID | 8228600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6046152 |
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| End bp | 6048041 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644932842 |
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| Product | acetate/CoA ligase |
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| Protein accession | YP_003089359 |
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| Protein GI | 255038738 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.596864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.856561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTA AGACCTTTGA AGAGTACAAG GTTGCTTACC AACAAAGTGT AGACGATCCC
GAAGGTTTCT GGGCGGAAGT AGCCCAACAT TTTCAATGGC GTAAACCGTG GAAGAAAGTG
CTAAGCTGGG ACTTTCAGGA AGCGCGTACG AAGTGGTTCG AAGGCGGCGT GATGAACATC
ACGGAAAACG CGCTGGACCG TCATCTGGCC GAGCGCGGCG ATCAGCCGGC GATCATCTGG
GAGCCCAACA ATCCCGAAGA CCAGGCGGTG ACCCTCACCT ACCATGTTTT GTTTGAACAA
GTTTGCCGGT TTGCCAATGT GCTCAAAAAG CATGGTGTGC AAAAAGGCGA CCGCGTTTGT
ATATACCTGC CGATGGTGCC CGAGCTGGCT GTGGCCGTGC TCGCCTGCGC ACGCATTGGC
GCGGTGCATT CGGTGGTTTT CGGTGGTTTT TCCGCCAAAT CCATCGCCGA TCGCATCAAT
GACGCCGAAT GTACAATGGT GATCACCTCC GACGGCGCAT TCCGCGGCGC GAAAGTGATT
CCGATGAAAG ATACTGTGGA TGAGGCGCTT GTGCAATGCT CTACGGTGAA GAAGGTGATC
GTGATGACGC GTACCCGCAC GCCGGTGCAC ATGCTCAAAG GTCGCGACCT TTGGTGGGAA
GAGGAAGTGA AGCAGGTGAA CTCCGTATGC CCGGCCGAGC CGATGGATGC CGAGGATATG
CTCTTTATCC TTTACACATC CGGCTCCACC GGCAAGCCGA AAGGCGTGGT GCATACCTGC
GGCGGATACA TGGTGTATGC CACTTACACA TTTGCCAATG TGTTCCAATA TGAGCCGGGC
GAAGTGCATT TCTGTACCGC CGACATTGGC TGGATCACCG GTCACAGCTA CATTGTGTAC
GGCCCGCTGT GCTACGGCGC CACGTCCGTG GTTTTCGAAG GCGTTCCGAC TTACCCGGAT
GCCAGCCGTT TCTGGAAAAT TGTAGAAAGA CATAAAGTAA ATATCCTTTA CACCGCACCT
ACGGCCATTC GCTCACTGAT GGGCTTTGGT TTGGATTTCG TTAAAGGACA TGATTTCTCA
TCGCTGCGCA AACTCGGATC GGTAGGGGAG CCTATCAACG AGGAAGCATG GCATTGGTAT
AAAACCAACA TCGGCGGCGA CCACTGCCCG CTGGTGGATA CCTGGTGGCA GACCGAAAAC
GGCGGTATCA TGATTTCGCC GCTAGCAGGC ATTACGCCCG AAAAACCGAC GTTCGCGACC
CTGCCTTTGC CGGGCATCCA GCCCGTGCTG GTGGACGAAA GCGGCAATGA GATCGAGGGC
AACGGCGTAA GCGGTAACCT GTGCATCAAG TTCCCGTGGC CTGGCATCAT CCGCACCACC
TACGGCGACC ACGAGCGCTG CCGCCAAACC TACTTCTCGA CCTACCCGGG CATGTATTTC
ACCGGCGACG GCTGTTTGCG TGATGAAGAC GGCTATTACC GCATTACCGG TCGGGTAGAC
GACGTGCTCA ACGTTTCCGG CCACCGTATC GGCACGGCCG AAGTGGAGAA TGCGATCAAT
ATGCACCTGG GCGTGGTGGA ATCGGCCGTA GTAGGCTACC CGCACGACAT TAAAGGCCAG
GGCATTTACG CATTTGTAAT TGCCGAGCAG ACGTCGGAAG ACCCCGACAT GTTCCGCAAG
GACATCGCGG TGACGGTATC CCGCATCATC GGCCCCATTG CCAAGCCGGA CAAGATCCAG
TTCGTATCCG GTCTACCCAA GACCCGTTCC GGCAAAATCA TGCGCCGGAT TTTGCGAAAA
ATCTCCGAAG GAGATGTTAG CAACCTGGGC GACACCTCCA CGCTCCTTGA CCCCGCCGTT
GTAGAGGAGA TCAAGGCAGG AAAGTTATAA
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| Protein sequence | MRIKTFEEYK VAYQQSVDDP EGFWAEVAQH FQWRKPWKKV LSWDFQEART KWFEGGVMNI
TENALDRHLA ERGDQPAIIW EPNNPEDQAV TLTYHVLFEQ VCRFANVLKK HGVQKGDRVC
IYLPMVPELA VAVLACARIG AVHSVVFGGF SAKSIADRIN DAECTMVITS DGAFRGAKVI
PMKDTVDEAL VQCSTVKKVI VMTRTRTPVH MLKGRDLWWE EEVKQVNSVC PAEPMDAEDM
LFILYTSGST GKPKGVVHTC GGYMVYATYT FANVFQYEPG EVHFCTADIG WITGHSYIVY
GPLCYGATSV VFEGVPTYPD ASRFWKIVER HKVNILYTAP TAIRSLMGFG LDFVKGHDFS
SLRKLGSVGE PINEEAWHWY KTNIGGDHCP LVDTWWQTEN GGIMISPLAG ITPEKPTFAT
LPLPGIQPVL VDESGNEIEG NGVSGNLCIK FPWPGIIRTT YGDHERCRQT YFSTYPGMYF
TGDGCLRDED GYYRITGRVD DVLNVSGHRI GTAEVENAIN MHLGVVESAV VGYPHDIKGQ
GIYAFVIAEQ TSEDPDMFRK DIAVTVSRII GPIAKPDKIQ FVSGLPKTRS GKIMRRILRK
ISEGDVSNLG DTSTLLDPAV VEEIKAGKL
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