| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4989 |
|---|
| Symbol | |
|---|
| ID | 8228595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6040571 |
|---|
| End bp | 6041701 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644932837 |
|---|
| Product | magnesium and cobalt transport protein CorA |
|---|
| Protein accession | YP_003089354 |
|---|
| Protein GI | 255038733 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.627889 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGAGA CTGAAAGCAA CAAACCGGCC AGAAACGGCC CCGCCCGAAA CGGCGGCAGG
AAATCCAGGA AGTACCGTAA GCGTGGCCTG CTCACTTCGC CGGGCACGCT TACGTACATC
GGGCCGGACG TTGCCCTGAA AACCAAGATC CGCCGGATAC GCTACAACGA GCATTCGTTT
AAAAAAGAGA ATGTAACGTC GCTCGATGAA TGCCGGCCGG ATCATGACGC ACAAAATTTC
ATTACCTGGC TCAATGTCGA CGGCATTCAC GAAGTGCCGC TGATCGAAAA GCTGGGTAAA
TTTTACCATT TGCACCCGCT GCTGCTCGAA GACGTTGTGA ACACCGAGCA CAAGCCGAAG
CTCGAATTGT ACGACACCGG GCATTTATTC CTCACCCTGA AAATGCTCCA CGTCGATTCG
GAATCGCCCA TCAGCATTTC TTCCGAGCAT GTGAGTTTTG TATTGGGTAA AAACTATGTC
GTCTCATTCC AGGAAGAGCT CACTTCCGAC ATTTTCACGA CCGTCGAGAA CCGACTGGAA
GCATCGGTAG GTAAAACCCG CCGCAACGGG CCCGACTACC TGCTTTTTGC ATTGATGGAC
GTGGTGGTGG ATAACTACTT CATCGTGCTG GAAAAGCTCG GTGATGCCCT CGACACGACG
GAAGACCAGG TGATCCGCGG CGTGCAGGAG CTTTCGCTGA AAGATATGTA CGCATTGAAA
CGCGAACTTA CACTGGCCCG CAGGCAGATA TGGCCGCTCC GCGATATGGT GAACCAGCTC
ATCCGGGAGG ATAGCATGCA GATCAGCAAG GAGGTAATCC CTTACTACCG TGACCTTTAC
GACCACATCA TGCAGGTTCT CGACACCATC GACTCCTACC GCGAACTGAT GGCGAGCCTG
GTGGACGTGC ATTTATCCAC CATCAGCAAC CGCATGAACC AGGTCATGAA AACGCTCACG
ATCTTCTCGG CCGTATTTAT GCCGCTGACG TTTATAGTGG GGGTTTACGG CATGAATTTC
GAGTTCATGC CCGAGCTGAA AGACCCCAAC GGTTACTATT ACGTATGGGG ATTGATGGTC
GCCGTTACGA TCGGGATGAT ATTTTATTTC AAAACTAAAA AGTGGATGTA G
|
|---|
| Protein sequence | MNETESNKPA RNGPARNGGR KSRKYRKRGL LTSPGTLTYI GPDVALKTKI RRIRYNEHSF
KKENVTSLDE CRPDHDAQNF ITWLNVDGIH EVPLIEKLGK FYHLHPLLLE DVVNTEHKPK
LELYDTGHLF LTLKMLHVDS ESPISISSEH VSFVLGKNYV VSFQEELTSD IFTTVENRLE
ASVGKTRRNG PDYLLFALMD VVVDNYFIVL EKLGDALDTT EDQVIRGVQE LSLKDMYALK
RELTLARRQI WPLRDMVNQL IREDSMQISK EVIPYYRDLY DHIMQVLDTI DSYRELMASL
VDVHLSTISN RMNQVMKTLT IFSAVFMPLT FIVGVYGMNF EFMPELKDPN GYYYVWGLMV
AVTIGMIFYF KTKKWM
|
|---|
| |