| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4984 |
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| Symbol | |
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| ID | 8228590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6028276 |
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| End bp | 6031443 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932832 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003089349 |
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| Protein GI | 255038728 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.380222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC CCAAAAAAAT CAGCGTTTAT TCATCGCTTA TTGCATTTGG ACTGGCAGTC
ATTGCATTCA GCGCATTCCG CCTGAACCAG CCGGCGCCGG TCAAGATCGG CAAGGGTACG
CATATTTCCC TCATCGGCAA CAACCTCGGG TCGCGGATGA TGAATTACGA CAACTTCGAA
ACAGAGTTGT ACATGCGCTA CCCCGACGAC AACCTCATTA TCCGCAACAT GTGCGACGGC
GGCGACACGC CCGGCTTCCG CCCGCACGCG AGTCGCAACA CGCCCTGGGC GTTCCCGGGC
GCGGAGAAGT TCCAGACAGA GCTGGCCAAC CCTTCTCAAA GCGAAGGCCA CCTCGAAACG
CCCGACCAAT GGCTTGCCCG CCTGAAAACT GACGTGATTA TTTCTTTTTT CGGGTATAAT
GAGTCATTTG AAGGCAAAGC GGGACTGGCC AACTACAAAG CCGAGCTCGA CGCATTCATT
AAATGGACAT TGCAGCAGAA ATATAATGGC ACCTCGGCGC CGCAGTTGGT GATCGTTTCG
CCCATCGCAT TTGAAGATCT TTCTGCTAAA TATGACCTGC CGAATGGTAA AAAGGAGAAT
GAAAACCTGC TTTTGTATAC CAAAGCCATG AAGGAAGTGG CGGATCAGAA TAAAGTTCTG
TTTGTGGATG CATTTGCCCC TTCGCAAAAG TGGTATGCCG AAAGCAAGGA AGACCTGACG
ATCGACGGCT CGCAGCTGAA TGCGGAAGGT TATAAAAAAC TGGGCGTATT GCTTGCCGAC
AAAATCTTCG GAAAGGCGTC GGTAAAAGGT AAAAACCGGG AACTGGTGCA CGCTGCCGTG
GACGAAAAGA ACTGGATGTG GCATAACGAC TTCAAAATCC CGAACGGCGT GCACGTATAT
GGCCGCCGCT ACAATCCATT CGGTCCGGAC AACTATCCGG CAGAAATCGA GAAAATCCGC
CAATTGACCG ACATTCGTGA CCAGGCGATC TGGCTGGCTG CTTCGAAAGG CGAGAAAACG
GACCTCGCCG CGGCGGATAA GAGTACCCGT ACATTGCCGG AGGTTAAAAC CAATTTTAAC
CCCGAAAAGA ACGGCAGCCT TACTTATTTG TATGGAAAAG AAGCATTGGC AAAACTGAAA
GTGCCGGATG GTTATAAGAT CGAGCTTTTC GCTTCGGAAG AGGAATTTCC GGATCTGGCT
AAACCAATGC AGATGTCGTT CGATAACAAA GGCCGCCTTT GGGTAGCTAC AATGCCGAGC
TATCCGCATT ACAAGCCGGG CGATTCGAAA CCGAACGATA AGATCATCAT TTTCGAAGAT
ACCAATAACG ACGGCAAGGC CGACAAGCAA ACCGTTTTCG CCGATGGCCT GCATTTACCA
TTGGGTTTTG AAATCGCCAA AGAGGGCGTT TACGTTTCGC AGGGCACCAA CTTCAAATTG
CTGATCGATT CGAATGGCGA TGGCAAGGCC GATAAAGAGG AAATCCTGCT GAGCGGATTC
GACGATCACG ACACGCACCA CAATAGCCAC GCATTTACAG TGGACCCGTC GGGTGCCATC
TATTCCGGCG AGGGCGTATT TTTGCATACC AATATTGAAA CCTCGTATGG TCCCGTACGT
GCGACGAACG GCGGTTTCTA CCGCTACGCA CCGCAGCTGA AAAAACTGGA ACGCACCGCA
CAGCTGTCGA TCCCGAACCC CTGGGGAATT GCATTCGACG ATTGGGGACA GCCCTTCTTT
GCCGAAACGT CGAGCCCGGA CGTGCGCTGG ATGCTGCCTG GTTCGGTATT GCCGCGTTAT
GGCGAGGCTA CCCACAAATC GGTGCAGCTC GTGGAAGACA AGCACCGTGT TCGCCCGACT
TCCGGACTGG AATTCGTGTC AAGCCGGCAT TTCCCGGATG AGCTGCAAGG CGACTTTTTG
ATTAACAACA CCATCGGATT CCTCGGAACG AAGGAGCACA CACTCACCGA CGACGGAACC
GGCTATAAGA GCCGCCATCG CCAGGACCTG GTCGTGAGCG ACGATCGCAA CTTCCGCCCC
GTGGACATGG AATTTGCGCC GGATGGCTCA TTGTACGTGA TCGACTGGCA TAATATCCTC
ATCGGGCACA TGCAGCACAA CGCCCGCGAC CCGCTGCGCG ACCACTCACA CGGCCGCGTT
TACCGGATTA CGTATCCGTC GCGCCCGCTG GTAACGCCGG CGAAAATCGA CGGCGCGAGC
ATTGAACAAC TGCTCGATAA CCTCAAATTA CCCGAGTACC GCACACGCTA CCGCACACGC
CGCGAGCTGC GCGGCCGCGA TGCCTCACAG GTGCTGTCCA AACTCAATAC CTGGGTGGCC
GGCCTGGACA AGAACGACCC GCGTTACGAA CACCATTTGC TGGAAGGCTT GTGGGTAAGC
TGGGGGATGA ACAAGGTGGA CCAAAAGCTG TTGAAGCAGG TATTGAATGC CAAAGATTAC
CATGCCCGCG CGGCTGCGGT GCAGGTGGTG CGCTATACCG GCCATCAGGT GCCCGACCAG
GCTGATTTGC TGATGCAGGC GGCGCGAGAC GAGAATAGCC GCGTGCGGTT AATGGCCATT
GTAGCGGCGT CTTGGATCGG TAAGGAAAAA GGCCTGCCGA TTTTGGCCGA AGCCCAGAAA
AAGCCACTCG ACGACTGGAT GATCCACGCG CACGAAGCTG CTGTGGCGCA TTTGAAAGGC
GAAAATGTGA AGAAAACGAA GCAAAATGTA GTTGCCACGA ACCTGAAAGG GAACGACCTG
ATCCTGTTTA ACCAGGGGCG GCAGATTTAC GCGAAAGAAG GCTACTGCGG CACCTGCCAT
CAGCCCGACG GCAAGGGGCT CGAAGCCTCC GGTTTCCCTC CGCTTTCGGG GCCGTGGGTG
ACGGGCAGCG ACGAGCGCCT GATCAAGATC GCGTTGAACG GCTTGCTTGG GCCAATCGAA
GTGAATGGCA AGAAGTATCC CGGCCAGGTG CCGATGACGC CGTTCGCGGG CTTGCTGAAC
GACACTGAAG TGGCCGCGGT GCTGACTTAT GTGCGTAATT CGTTCGGAAA TAAAGGCGCG
GCGATCCCGC CTGAAAAGGT AAAACAGGTG CGTGCCGCCA CCGAAAGCAA GAAAGACTTC
TATTCGCCCG AACAGCTTTT AAAAGAGCAT CCTATCGAAA AAATGTAG
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| Protein sequence | MSKPKKISVY SSLIAFGLAV IAFSAFRLNQ PAPVKIGKGT HISLIGNNLG SRMMNYDNFE
TELYMRYPDD NLIIRNMCDG GDTPGFRPHA SRNTPWAFPG AEKFQTELAN PSQSEGHLET
PDQWLARLKT DVIISFFGYN ESFEGKAGLA NYKAELDAFI KWTLQQKYNG TSAPQLVIVS
PIAFEDLSAK YDLPNGKKEN ENLLLYTKAM KEVADQNKVL FVDAFAPSQK WYAESKEDLT
IDGSQLNAEG YKKLGVLLAD KIFGKASVKG KNRELVHAAV DEKNWMWHND FKIPNGVHVY
GRRYNPFGPD NYPAEIEKIR QLTDIRDQAI WLAASKGEKT DLAAADKSTR TLPEVKTNFN
PEKNGSLTYL YGKEALAKLK VPDGYKIELF ASEEEFPDLA KPMQMSFDNK GRLWVATMPS
YPHYKPGDSK PNDKIIIFED TNNDGKADKQ TVFADGLHLP LGFEIAKEGV YVSQGTNFKL
LIDSNGDGKA DKEEILLSGF DDHDTHHNSH AFTVDPSGAI YSGEGVFLHT NIETSYGPVR
ATNGGFYRYA PQLKKLERTA QLSIPNPWGI AFDDWGQPFF AETSSPDVRW MLPGSVLPRY
GEATHKSVQL VEDKHRVRPT SGLEFVSSRH FPDELQGDFL INNTIGFLGT KEHTLTDDGT
GYKSRHRQDL VVSDDRNFRP VDMEFAPDGS LYVIDWHNIL IGHMQHNARD PLRDHSHGRV
YRITYPSRPL VTPAKIDGAS IEQLLDNLKL PEYRTRYRTR RELRGRDASQ VLSKLNTWVA
GLDKNDPRYE HHLLEGLWVS WGMNKVDQKL LKQVLNAKDY HARAAAVQVV RYTGHQVPDQ
ADLLMQAARD ENSRVRLMAI VAASWIGKEK GLPILAEAQK KPLDDWMIHA HEAAVAHLKG
ENVKKTKQNV VATNLKGNDL ILFNQGRQIY AKEGYCGTCH QPDGKGLEAS GFPPLSGPWV
TGSDERLIKI ALNGLLGPIE VNGKKYPGQV PMTPFAGLLN DTEVAAVLTY VRNSFGNKGA
AIPPEKVKQV RAATESKKDF YSPEQLLKEH PIEKM
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